In this post I will demonstrate SimpleITK, an abstraction layer over the ITK library, to segment/label the white and gray matter from an MRI dataset. I will start with an intro on what SimpleITK is, what it can do, and how to install it. The tutorial will include loading a DICOM file-series, image smoothing/denoising, region-growing…
G. Truong, S. Gilani, S. Islam, and D. Suter. 2019 Digital Image Computing: Techniques and Applications (DICTA), page 1-8. (December 2019)DST Best Science Paper Award.
Y. Xie, F. Shu, J. Rambach, A. Pagani, and D. Stricker. (2021)cite arxiv:2110.11219Comment: accepted to BMVC 2021, code opensource: https://github.com/EryiXie/PlaneRecNet.