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1Lessons on protein structure from interleukin-4: All disulfides are not created equal
D. Vaz, J. Rodrigues, N. Loureiro-Ferreira, T. Muller, W. Sebald, C. Redfield, and R. Brito. Proteins, 92 (2): 219-235 (2024)Vaz, Daniela C Rodrigues, J Rui Loureiro-Ferreira, Nuno Muller, Thomas D Sebald, Walter Redfield, Christina Brito, Rui M M eng European Regional Development Fund/ UIDB/00313/2020/Fundacao para a Ciencia e a Tecnologia/ UIDP/00313/2020/Fundacao para a Ciencia e a Tecnologia/ CENTRO-07-CT62-FEDER-002012/FEDER/COMPETE/ RECI/QEQ-QFI/0168/2012/FEDER/COMPETE/ Rede Nacional de Ressonancia Magnetica Nuclear (RNRMN/PTNMR)/ LA/P/0045/2020/ALiCE/ UIDP/50020/2020/LSRE-LCM/ UIDB/50020/2020/LSRE-LCM/ FCT/MCTES (PIDDAC)/ 2023/10/10 Proteins. 2024 Feb;92(2):219-235. doi: 10.1002/prot.26611. Epub 2023 Oct 10..
9 months ago by @jvsi_all
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myOwn
Conformation
Protein
myOwnConformationProtein
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1Effect of Genotype on Body Conformation and Udder Morphometrics in Milking Dairy Cows in Humid Tropical Conditions of Kwara State
O. Omoniwa D. O | Okeke R. O | Adeniyi. INTERNATIONAL JOURNAL OF TREND IN SCIENTIFIC RESEARCH AND DEVELOPMENT, 5 (5): 1-3 (August 2021)
3 years ago by @ijtsrd
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Breed
Dairy
Anova
Conformation
BreedDairyAnovaConformation
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2Confab - Systematic generation of diverse low-energy conformers
N. O'Boyle, T. Vandermeersch, C. Flynn, A. Maguire, and G. Hutchison. Journal of Cheminformatics, 3 (1): 8+ (2011)
6 years ago by @fairybasslet
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rotatable\_bonds
openbabel
algorithms
conflab
opensource
conformation
rotatable\_bondsopenbabelalgorithmsconflabopensourceconformation
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1Membrane-mediated assembly of filamentous bacteriophage \Pf\1 coat protein
R. Nambudripad, W. Stark, S. Opella, and L. Makowski. Science, 252 (5010): 1305--1308 (May 1991)
8 years ago by @nmrresource
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Spectroscopy,Models,Molecular,Molecular
Bonding,Magnetic
Structure,Neutrons,Protein
Bacteriophages,Capsid,Capsid
Resonance
Proteins,Cell
Conformation
Membrane,Hydrogen
Spectroscopy,Models,Molecular,MolecularBonding,MagneticStructure,Neutrons,ProteinBacteriophages,Capsid,CapsidResonanceProteins,CellConformationMembrane,Hydrogen
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1Two-dimensional \NMR\ spectroscopy of peptides on beads
R. Jelinek, A. Valente, K. Valentine, and S. Opella. J. Magn. Reson., 125 (1): 185--187 (March 1997)
8 years ago by @nmrresource
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gp120,Magnetic
Envelope
Spectroscopy,Peptides,Protein
HIV
Resonance
Conformation
Protein
gp120,MagneticEnvelopeSpectroscopy,Peptides,ProteinHIVResonanceConformationProtein
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1Structure and regulation of G protein-coupled receptors: the beta 2-adrenergic receptor as a model
S. Collins, M. Lohse, B. O'Dowd, M. Caron, and R. Lefkowitz. Vitam Horm, (1991)Collins, S Lohse, M J O'Dowd, B Caron, M G Lefkowitz, R J Review United states Vitamins and hormones Vitam Horm. 1991;46:1-39..
14 years ago by @pharmawuerz
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Acid
Humans
beta/*chemistry/genetics/*physiology
Up-Regulation
Down-Regulation
Data
Post-Translational
Sequence
Adrenergic
Base
Protein
Proteins/*physiology
Animals
Receptor
Molecular
GTP-Binding
Transduction
Amino
Signal
Processing,
Conformation
AcidHumansbeta/*chemistry/genetics/*physiologyUp-RegulationDown-RegulationDataPost-TranslationalSequenceAdrenergicBaseProteinProteins/*physiologyAnimalsReceptorMolecularGTP-BindingTransductionAminoSignalProcessing,Conformation
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1Differential conformational requirements for activation of G proteins and the regulatory proteins arrestin and G protein-coupled receptor kinase in the G protein-coupled receptor for parathyroid hormone (PTH)/PTH-related protein
J. Vilardaga, M. Frank, C. Krasel, C. Dees, R. Nissenson, and M. Lohse. J Biol Chem, 276 (36): 33435-43 (September 2001)Vilardaga, J P Frank, M Krasel, C Dees, C Nissenson, R A Lohse, M J Research Support, Non-U.S. Gov't United States The Journal of biological chemistry J Biol Chem. 2001 Sep 7;276(36):33435-43. Epub 2001 May 31..
14 years ago by @pharmawuerz
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COS
Protein-Serine-Threonine
Competitive
Inhibitory
Kinetics
Mutation
Conformation
Factors
Compounds/pharmacology
Hormone/*metabolism
Hormone,
Activation
Immunoblotting
Ions/metabolism
Chlorides/pharmacology
Time
Arrestin/*metabolism
Dose-Response
50
Relationship,
Phosphates/metabolism
Cell
Histidine/chemistry
Binding
Inositol
Sites
Zinc
Concentration
Membrane/metabolism
Protein
1
Type
Animals
Receptor
Cyclic
Kinases/*metabolism
Zinc/metabolism
Transduction
Ligands
AMP/metabolism
Phosphorylation
Binding,
Arrestins/metabolism
Proteins/metabolism
GTP-Binding
Enzyme
Parathyroid
Signal
Drug
COSProtein-Serine-ThreonineCompetitiveInhibitoryKineticsMutationConformationFactorsCompounds/pharmacologyHormone/*metabolismHormone,ActivationImmunoblottingIons/metabolismChlorides/pharmacologyTimeArrestin/*metabolismDose-Response50Relationship,Phosphates/metabolismCellHistidine/chemistryBindingInositolSitesZincConcentrationMembrane/metabolismProtein1TypeAnimalsReceptorCyclicKinases/*metabolismZinc/metabolismTransductionLigandsAMP/metabolismPhosphorylationBinding,Arrestins/metabolismProteins/metabolismGTP-BindingEnzymeParathyroidSignalDrug
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1Receptor protein-tyrosine kinases and their signal transduction pathways
G. van der, T. Hunter, and R. Lindberg. Annu.Rev.Cell Biol., (1994)
15 years ago by @kanefendt
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Multigene
physiology
Data
Biological
Sequence
classification
Protein
Animals
Receptor
Kinase
Models
Transduction
Family
Conformation
Acid
Phosphorylation
Growth
Laboratories
Protein-Tyrosine
Humans
Homology
Post-Translational
Processing
Substances
genetics
Kinases
Molecular
Alignment
Receptors
Factor
Amino
Signal
MultigenephysiologyDataBiologicalSequenceclassificationProteinAnimalsReceptorKinaseModelsTransductionFamilyConformationAcidPhosphorylationGrowthLaboratoriesProtein-TyrosineHumansHomologyPost-TranslationalProcessingSubstancesgeneticsKinasesMolecularAlignmentReceptorsFactorAminoSignal
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1VEGF receptor protein-tyrosine kinases: structure and regulation
R. Roskoski. Biochem.Biophys.Res.Commun., 375 (3): 287-291 (2008)
15 years ago by @kanefendt
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Human
Tyrosine
Phosphorylation
Growth
Protein-Tyrosine
Humans
Research
Vascular
blood
classification
Protein
Animals
Receptor
Kinases
Receptors
Kinase
Chemistry
Factor
Endothelial
Mice
Receptor-1
metabolism
Conformation
HumanTyrosinePhosphorylationGrowthProtein-TyrosineHumansResearchVascularbloodclassificationProteinAnimalsReceptorKinasesReceptorsKinaseChemistryFactorEndothelialMiceReceptor-1metabolismConformation
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1Receptor tyrosine kinases: mechanisms of activation and signaling
S. Hubbard, and W. Miller. Curr.Opin.Cell Biol., 19 (2): 117-123 (2007)
15 years ago by @kanefendt
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Binding
Tyrosine
Coenzymes
Protein-Tyrosine
Humans
Activation
Biological
Research
Protein
Animals
Receptor
Kinases
Kinase
pharmacology
Cross-Talk
Models
Transduction
Enzyme
Ligands
metabolism
Signal
Conformation
BindingTyrosineCoenzymesProtein-TyrosineHumansActivationBiologicalResearchProteinAnimalsReceptorKinasesKinasepharmacologyCross-TalkModelsTransductionEnzymeLigandsmetabolismSignalConformation
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1FLT4 receptor tyrosine kinase contains seven immunoglobulin-like loops and is expressed in multiple human tissues and cell lines
K. Pajusola, O. Aprelikova, J. Korhonen, A. Kaipainen, L. Pertovaara, R. Alitalo, and K. Alitalo. Cancer Res., 52 (20): 5738-5743 (1992)
15 years ago by @kanefendt
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Human
Receptor-3
Cloning
isolation
blood
Base
Cells
Kinase
Chemistry
Line
Dna
Expression
Conformation
Epithelial
Teratoma
Protein-Tyrosine
Growth
Humans
Leukemia
Homology
Research
Blood
genetics
Receptors
protein
purification
Development
Species
Nucleic
Cell
Tyrosine
Immunoglobulins
&
Down-Regulation
Vessels
Data
Sequence
Vascular
Protein
Distribution
cells
Differentiation
pathology
Embryonic
Acid
Lung
Surface
Tissue
Kinases
Molecular
Gene
Specificity
Fetal
Factor
and
Endothelial
Amino
HumanReceptor-3CloningisolationbloodBaseCellsKinaseChemistryLineDnaExpressionConformationEpithelialTeratomaProtein-TyrosineGrowthHumansLeukemiaHomologyResearchBloodgeneticsReceptorsproteinpurificationDevelopmentSpeciesNucleicCellTyrosineImmunoglobulins&Down-RegulationVesselsDataSequenceVascularProteinDistributioncellsDifferentiationpathologyEmbryonicAcidLungSurfaceTissueKinasesMolecularGeneSpecificityFetalFactorandEndothelialAmino
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1Conformation and dynamics of interacting polymer chains in a porous medium
G. Foo, and R. Pandey. Physica A: Statistical and Theoretical Physics, 241 (3-4): 500--517 (Jul 15, 1997)
17 years ago by @smicha
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Conformation
Conformation
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1Correlated C-C and C-O bond conformations in saccharide hydroxymethyl groups: parametrization and application of redundant 1H-1H, 13C-1H, and 13C-13C NMR J-couplings
C. Thibaudeau, R. Stenutz, B. Hertz, T. Klepach, S. Zhao, Q. Wu, I. Carmichael, and A. Serianni. Journal of the American Chemical Society, 126 (48): 15668-15685 (December 2004)
18 years ago by @rstenutz
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imported
nmr
hydroxymethyl
j-coupling
carbon-13
conformation
carbohydrate
importednmrhydroxymethylj-couplingcarbon-13conformationcarbohydrate
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1Methyl 2-O-beta-D-glucopyranosyl-alpha-L-rhamnopyranoside
L. Eriksson, R. Stenutz, and G. Widmalm. Acta Crystallogr C, 58 (Pt 6): 328-329 (June 2002)
18 years ago by @rstenutz
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diffraction
x-ray
conformation
carbohydrate
structure
diffractionx-rayconformationcarbohydratestructure
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1Hydroxymethyl group conformation in saccharides: structural dependencies of (2)J(HH), (3)J(HH), and (1)J(CH) spin-spin coupling constants
R. Stenutz, I. Carmichael, G. Widmalm, and A. Serianni. Journal of Organic Chemistry, 67 (3): 949-958 (February 2002)
18 years ago by @rstenutz
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nmr
hydroxymethyl
j-coupling
carbon-13
conformation
carbohydrate
nmrhydroxymethylj-couplingcarbon-13conformationcarbohydrate
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1Methyl 4-O-β-L-fucopyranosyl-α-D-glucopyranoside hemihydrate
L. Eriksson, R. Stenutz, and G. Widmalm. Acta Crystallographica, Section C, (2000)
18 years ago by @rstenutz
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diffraction
x-ray
conformation
carbohydrate
structure
diffractionx-rayconformationcarbohydratestructure
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1Methyl β-lactoside methyl 4-O-β-D-galactopyranosyl-β-D-glucopyranoside
M. Shang, R. Stenutz, and A. Serianni. Acta Crystallographica, Section C, (1999)
18 years ago by @rstenutz
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diffraction
x-ray
conformation
carbohydrate
structure
diffractionx-rayconformationcarbohydratestructure
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1Three-Bond C-O-C-C Spin-Coupling Constants in Carbohydrates: Development of a Karplus Relationship
B. Bose, S. Zhao, R. Stenutz, F. Cloran, P. Bondo, G. Bondo, B. Hertz, I. Carmichael, and A. Serianni. Journal of the American Chemical Society, (1998)
18 years ago by @rstenutz
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nmr
j-coupling
relationship
carbon-13
conformation
carbohydrate
nmrj-couplingrelationshipcarbon-13conformationcarbohydrate
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1MMC and LD simulations of alpha-D-Glcp-(1-->2)-alpha-D-Glcp-(1-->3)-alpha-D-Glcp-OMe. A model for the terminal trisaccharide in glycoprotein precursors
R. Stenutz, and G. Widmalm. Glycoconj J, 15 (4): 415-418 (April 1998)
18 years ago by @rstenutz
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modeling
dynamics
molecular
metropolis
montecarlo
langevin
conformation
carbohydrate
modelingdynamicsmolecularmetropolismontecarlolangevinconformationcarbohydrate
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1Synthesis of site-specific deuterium substituted methyl 6-O-(R)- and (S)-1-carboxyethyl -α-D-galactopyranoside and conformational analysis thereof based on J couplings
R. Stenutz, Å. Pilotti, P. Jansson, and G. Widmalm. Carbohydrate Research, (1998)
18 years ago by @rstenutz
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deuterium
hydroxymethyl
j-coupling
synthesis
isotope
conformation
carbohydrate
deuteriumhydroxymethylj-couplingsynthesisisotopeconformationcarbohydrate
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