%0 Journal Article %1 Magnusdottir2017Modeling %A Magnúsdóttir, Stefan\'ıa %A Thiele, Ines %D 2017 %J Current opinion in biotechnology %K communities gut-microbiome review %P 90--96 %T Modeling metabolism of the human gut microbiome. %U http://view.ncbi.nlm.nih.gov/pubmed/29258014 %V 51 %X The human gut microbiome plays an important part in human health. The complexity of the microbiome makes it difficult to determine the detailed metabolic functions and cross-talk occurs between the individual species. In silico systems biology studies of the microbiome can help to identify metabolite exchanges among gut microbes. Constraint-based reconstruction and analysis methods use biochemically accurate genome-scale metabolic networks of microorganisms to simulate metabolism between species in a given microbiome and help generate novel hypotheses on microbial interactions. Here, we review metabolic modeling studies that have investigated metabolic functions of the gut microbiome. Copyright \copyright 2017. Published by Elsevier Ltd.

@article{Magnusdottir2017Modeling, abstract = {The human gut microbiome plays an important part in human health. The complexity of the microbiome makes it difficult to determine the detailed metabolic functions and cross-talk occurs between the individual species. In silico systems biology studies of the microbiome can help to identify metabolite exchanges among gut microbes. Constraint-based reconstruction and analysis methods use biochemically accurate genome-scale metabolic networks of microorganisms to simulate metabolism between species in a given microbiome and help generate novel hypotheses on microbial interactions. Here, we review metabolic modeling studies that have investigated metabolic functions of the gut microbiome. Copyright {\copyright} 2017. Published by Elsevier Ltd.}, added-at = {2018-12-02T16:09:07.000+0100}, author = {Magn\'{u}sd\'{o}ttir, Stefan\'{\i}a and Thiele, Ines}, biburl = {https://www.bibsonomy.org/bibtex/28eb8502d022a6f222a61e88880bed885/karthikraman}, citeulike-article-id = {14594482}, citeulike-linkout-0 = {http://view.ncbi.nlm.nih.gov/pubmed/29258014}, citeulike-linkout-1 = {http://www.hubmed.org/display.cgi?uids=29258014}, day = 16, interhash = {c1647d050d220850b6439ef3436fbec3}, intrahash = {8eb8502d022a6f222a61e88880bed885}, issn = {1879-0429}, journal = {Current opinion in biotechnology}, keywords = {communities gut-microbiome review}, month = dec, pages = {90--96}, pmid = {29258014}, posted-at = {2018-05-26 17:22:42}, priority = {2}, timestamp = {2018-12-02T16:09:07.000+0100}, title = {Modeling metabolism of the human gut microbiome.}, url = {http://view.ncbi.nlm.nih.gov/pubmed/29258014}, volume = 51, year = 2017 }