Modelling Fungal Hyphal Growth with an Exclusion Process
M. Evans, K. Sugden, W. Poon, and N. Read. Abstract Book of the XXIII IUPAP International Conference on Statistical Physics, Genova, Italy, (9-13 July 2007)
Abstract
A simple model for mass transport within a growing fungal
filament is proposed. Inspired by the role in fungal tip
growth of microtubule-transported vesicles, we embody the dynamics of mass
along a quasi-one-dimensional hypha with mutually excluding particles hopping on a growing one-dimensional
lattice. The model is a generalisation of the asymmetric exclusion process (ASEP) to a dynamically extending
lattice.
We discuss mean-field and improved mean-field equations and present a phase diagram of the model's steady state
behaviour
which generalises that of the ASEP.
In particular we identify a region in which a shock in the density
travels forward more slowly than the tip of the lattice and thus moves away from both boundaries.
We compare our results to experimental data in the context of
filamentous fungus, Neurospora crassa, and discuss possible mechniasms for
Spitzenkorper formation.
Reference
K. E. P. Sugden, M. R. Evans, W. C. K. Poon and N. D. Read
Phys. Rev. E vol. 75, 031909 (2007)
%0 Book Section
%1 statphys23_0392
%A Evans, M.R.
%A Sugden, K.E.P.
%A Poon, W.C.K.
%A Read, N.D.
%B Abstract Book of the XXIII IUPAP International Conference on Statistical Physics
%C Genova, Italy
%D 2007
%E Pietronero, Luciano
%E Loreto, Vittorio
%E Zapperi, Stefano
%K asymmetric exclusion fungal growth molecular motors process statphys23 topic-10
%T Modelling Fungal Hyphal Growth with an Exclusion Process
%U http://st23.statphys23.org/webservices/abstract/preview_pop.php?ID_PAPER=392
%X A simple model for mass transport within a growing fungal
filament is proposed. Inspired by the role in fungal tip
growth of microtubule-transported vesicles, we embody the dynamics of mass
along a quasi-one-dimensional hypha with mutually excluding particles hopping on a growing one-dimensional
lattice. The model is a generalisation of the asymmetric exclusion process (ASEP) to a dynamically extending
lattice.
We discuss mean-field and improved mean-field equations and present a phase diagram of the model's steady state
behaviour
which generalises that of the ASEP.
In particular we identify a region in which a shock in the density
travels forward more slowly than the tip of the lattice and thus moves away from both boundaries.
We compare our results to experimental data in the context of
filamentous fungus, Neurospora crassa, and discuss possible mechniasms for
Spitzenkorper formation.
Reference
K. E. P. Sugden, M. R. Evans, W. C. K. Poon and N. D. Read
Phys. Rev. E vol. 75, 031909 (2007)
@incollection{statphys23_0392,
abstract = {A simple model for mass transport within a growing fungal
filament is proposed. Inspired by the role in fungal tip
growth of microtubule-transported vesicles, we embody the dynamics of mass
along a quasi-one-dimensional hypha with mutually excluding particles hopping on a growing one-dimensional
lattice. The model is a generalisation of the asymmetric exclusion process (ASEP) to a dynamically extending
lattice.
We discuss mean-field and improved mean-field equations and present a phase diagram of the model's steady state
behaviour
which generalises that of the ASEP.
In particular we identify a region in which a shock in the density
travels forward more slowly than the tip of the lattice and thus moves away from both boundaries.
We compare our results to experimental data in the context of
filamentous fungus, Neurospora crassa, and discuss possible mechniasms for
Spitzenkorper formation.
Reference
K. E. P. Sugden, M. R. Evans, W. C. K. Poon and N. D. Read
Phys. Rev. E vol. 75, 031909 (2007)},
added-at = {2007-06-20T10:16:09.000+0200},
address = {Genova, Italy},
author = {Evans, M.R. and Sugden, K.E.P. and Poon, W.C.K. and Read, N.D.},
biburl = {https://www.bibsonomy.org/bibtex/2aa92d4c6442df8db3f7fbd8319b5a7e0/statphys23},
booktitle = {Abstract Book of the XXIII IUPAP International Conference on Statistical Physics},
editor = {Pietronero, Luciano and Loreto, Vittorio and Zapperi, Stefano},
interhash = {fdff44c6b2dd2eca1d3ef62778530699},
intrahash = {aa92d4c6442df8db3f7fbd8319b5a7e0},
keywords = {asymmetric exclusion fungal growth molecular motors process statphys23 topic-10},
month = {9-13 July},
timestamp = {2007-06-20T10:16:19.000+0200},
title = {Modelling Fungal Hyphal Growth with an Exclusion Process},
url = {http://st23.statphys23.org/webservices/abstract/preview_pop.php?ID_PAPER=392},
year = 2007
}