In this paper, we review the central concepts and implementations of tools for working with network structures in Bioconductor. Interfaces to open source resources for visualization (AT&T Graphviz) and network algorithms (Boost) have been developed to support analysis of graphical structures in genomics and computational biology. AVAILABILITY: Packages graph, Rgraphviz, RBGL of Bioconductor (www.bioconductor.org).
Description
Network structures and algorithms in Bioconductor. [Bioinformatics. 2005] - PubMed Result
%0 Journal Article
%1 Carey:2005:Bioinformatics:15297301
%A Carey, V J
%A Gentry, J
%A Whalen, E
%A Gentleman, R
%D 2005
%J Bioinformatics
%K microarray
%N 1
%P 135-136
%R 10.1093/bioinformatics/bth458
%T Network structures and algorithms in Bioconductor
%U http://www.ncbi.nlm.nih.gov/pubmed/15297301?dopt=Abstract
%V 21
%X In this paper, we review the central concepts and implementations of tools for working with network structures in Bioconductor. Interfaces to open source resources for visualization (AT&T Graphviz) and network algorithms (Boost) have been developed to support analysis of graphical structures in genomics and computational biology. AVAILABILITY: Packages graph, Rgraphviz, RBGL of Bioconductor (www.bioconductor.org).
@article{Carey:2005:Bioinformatics:15297301,
abstract = {In this paper, we review the central concepts and implementations of tools for working with network structures in Bioconductor. Interfaces to open source resources for visualization (AT\&T Graphviz) and network algorithms (Boost) have been developed to support analysis of graphical structures in genomics and computational biology. AVAILABILITY: Packages graph, Rgraphviz, RBGL of Bioconductor (www.bioconductor.org).},
added-at = {2008-12-13T18:09:12.000+0100},
author = {Carey, V J and Gentry, J and Whalen, E and Gentleman, R},
biburl = {https://www.bibsonomy.org/bibtex/2e1be7f9832e5a88cf3b1926fddd3eaab/ben8bibsonomy},
description = {Network structures and algorithms in Bioconductor. [Bioinformatics. 2005] - PubMed Result},
doi = {10.1093/bioinformatics/bth458},
interhash = {66ee75e60f81f3b98f072e0a094f9ac4},
intrahash = {e1be7f9832e5a88cf3b1926fddd3eaab},
journal = {Bioinformatics},
keywords = {microarray},
month = Jan,
number = 1,
pages = {135-136},
pmid = {15297301},
timestamp = {2008-12-13T18:09:12.000+0100},
title = {Network structures and algorithms in Bioconductor},
url = {http://www.ncbi.nlm.nih.gov/pubmed/15297301?dopt=Abstract},
volume = 21,
year = 2005
}