GPCR-OKB: the G Protein Coupled Receptor Oligomer Knowledge Base
G. Khelashvili, K. Dorff, J. Shan, M. Camacho-Artacho, L. Skrabanek, B. Vroling, M. Bouvier, L. Devi, S. George, J. Javitch, M. Lohse, G. Milligan, R. Neubig, K. Palczewski, M. Parmentier, J. Pin, G. Vriend, F. Campagne, and M. Filizola. Bioinformatics, 26 (14):
1804-5(July 2010)Khelashvili, George Dorff, Kevin Shan, Jufang Camacho-Artacho, Marta
Skrabanek, Lucy Vroling, Bas Bouvier, Michel Devi, Lakshmi A George,
Susan R Javitch, Jonathan A Lohse, Martin J Milligan, Graeme Neubig,
Richard R Palczewski, Krzysztof Parmentier, Marc Pin, Jean-Philippe
Vriend, Gerrit Campagne, Fabien Filizola, Marta DA017976/DA/NIDA
NIH HHS/United States Research Support, N.I.H., Extramural Research
Support, Non-U.S. Gov't England Bioinformatics (Oxford, England)
Bioinformatics. 2010 Jul 15;26(14):1804-5. Epub 2010 May 25..
Abstract
SUMMARY: Rapid expansion of available data about G Protein Coupled
Receptor (GPCR) dimers/oligomers over the past few years requires
an effective system to organize this information electronically.
Based on an ontology derived from a community dialog involving colleagues
using experimental and computational methodologies, we developed
the GPCR-Oligomerization Knowledge Base (GPCR-OKB). GPCR-OKB is a
system that supports browsing and searching for GPCR oligomer data.
Such data were manually derived from the literature. While focused
on GPCR oligomers, GPCR-OKB is seamlessly connected to GPCRDB, facilitating
the correlation of information about GPCR protomers and oligomers.
Availability and Implementation: The GPCR-OKB web application is
freely available at http://www.gpcr-okb.org
Khelashvili, George Dorff, Kevin Shan, Jufang Camacho-Artacho, Marta
Skrabanek, Lucy Vroling, Bas Bouvier, Michel Devi, Lakshmi A George,
Susan R Javitch, Jonathan A Lohse, Martin J Milligan, Graeme Neubig,
Richard R Palczewski, Krzysztof Parmentier, Marc Pin, Jean-Philippe
Vriend, Gerrit Campagne, Fabien Filizola, Marta DA017976/DA/NIDA
NIH HHS/United States Research Support, N.I.H., Extramural Research
Support, Non-U.S. Gov't England Bioinformatics (Oxford, England)
Bioinformatics. 2010 Jul 15;26(14):1804-5. Epub 2010 May 25.
%0 Journal Article
%1 Khelashvili2010
%A Khelashvili, G.
%A Dorff, K.
%A Shan, J.
%A Camacho-Artacho, M.
%A Skrabanek, L.
%A Vroling, B.
%A Bouvier, M.
%A Devi, L. A.
%A George, S. R.
%A Javitch, J. A.
%A Lohse, M. J.
%A Milligan, G.
%A Neubig, R. R.
%A Palczewski, K.
%A Parmentier, M.
%A Pin, J. P.
%A Vriend, G.
%A Campagne, F.
%A Filizola, M.
%D 2010
%J Bioinformatics
%K *Software Bases Databases, Factual G-Protein-Coupled/*chemistry Internet Knowledge Receptor
%N 14
%P 1804-5
%T GPCR-OKB: the G Protein Coupled Receptor Oligomer Knowledge Base
%U http://www.ncbi.nlm.nih.gov/pubmed/20501551
%V 26
%X SUMMARY: Rapid expansion of available data about G Protein Coupled
Receptor (GPCR) dimers/oligomers over the past few years requires
an effective system to organize this information electronically.
Based on an ontology derived from a community dialog involving colleagues
using experimental and computational methodologies, we developed
the GPCR-Oligomerization Knowledge Base (GPCR-OKB). GPCR-OKB is a
system that supports browsing and searching for GPCR oligomer data.
Such data were manually derived from the literature. While focused
on GPCR oligomers, GPCR-OKB is seamlessly connected to GPCRDB, facilitating
the correlation of information about GPCR protomers and oligomers.
Availability and Implementation: The GPCR-OKB web application is
freely available at http://www.gpcr-okb.org
@article{Khelashvili2010,
abstract = {SUMMARY: Rapid expansion of available data about G Protein Coupled
Receptor (GPCR) dimers/oligomers over the past few years requires
an effective system to organize this information electronically.
Based on an ontology derived from a community dialog involving colleagues
using experimental and computational methodologies, we developed
the GPCR-Oligomerization Knowledge Base (GPCR-OKB). GPCR-OKB is a
system that supports browsing and searching for GPCR oligomer data.
Such data were manually derived from the literature. While focused
on GPCR oligomers, GPCR-OKB is seamlessly connected to GPCRDB, facilitating
the correlation of information about GPCR protomers and oligomers.
Availability and Implementation: The GPCR-OKB web application is
freely available at http://www.gpcr-okb.org},
added-at = {2010-12-14T18:12:02.000+0100},
author = {Khelashvili, G. and Dorff, K. and Shan, J. and Camacho-Artacho, M. and Skrabanek, L. and Vroling, B. and Bouvier, M. and Devi, L. A. and George, S. R. and Javitch, J. A. and Lohse, M. J. and Milligan, G. and Neubig, R. R. and Palczewski, K. and Parmentier, M. and Pin, J. P. and Vriend, G. and Campagne, F. and Filizola, M.},
biburl = {https://www.bibsonomy.org/bibtex/2ea0f50571d2dca061bf4748c8476bbd7/pharmawuerz},
comment = {2894509},
endnotereftype = {Journal Article},
groups = {private},
interhash = {53d93008332e74280a6a2781a4b1fe85},
intrahash = {ea0f50571d2dca061bf4748c8476bbd7},
issn = {1367-4811 (Electronic) 1367-4803 (Linking)},
journal = {Bioinformatics},
keywords = {*Software Bases Databases, Factual G-Protein-Coupled/*chemistry Internet Knowledge Receptor},
month = {Jul 15},
note = {Khelashvili, George Dorff, Kevin Shan, Jufang Camacho-Artacho, Marta
Skrabanek, Lucy Vroling, Bas Bouvier, Michel Devi, Lakshmi A George,
Susan R Javitch, Jonathan A Lohse, Martin J Milligan, Graeme Neubig,
Richard R Palczewski, Krzysztof Parmentier, Marc Pin, Jean-Philippe
Vriend, Gerrit Campagne, Fabien Filizola, Marta DA017976/DA/NIDA
NIH HHS/United States Research Support, N.I.H., Extramural Research
Support, Non-U.S. Gov't England Bioinformatics (Oxford, England)
Bioinformatics. 2010 Jul 15;26(14):1804-5. Epub 2010 May 25.},
number = 14,
pages = {1804-5},
shorttitle = {GPCR-OKB: the G Protein Coupled Receptor Oligomer Knowledge Base},
timestamp = {2010-12-14T18:20:04.000+0100},
title = {GPCR-OKB: the G Protein Coupled Receptor Oligomer Knowledge Base},
url = {http://www.ncbi.nlm.nih.gov/pubmed/20501551},
volume = 26,
year = 2010
}