tag :: Acid amino sequence

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1A Targeted Proteomics Approach to the Rapid Identification of Bacterial Cell Mixtures by Matrix-Assisted Laser Desorption/Ionization Mass Spectrometry.
B. Warscheid, and C. Fenselau. Proteomics, 4 (10): 2877--2892 (October 2004)
6 months ago by @warscheidlab
show all tags
Acid
Amino
Data,Peptides/chemistry,Proteins/chemistry,Proteome,Proteomics/*methods,Ribosomes/metabolism,Species
Desorption-Ionization/*methods,Time
Factors,to_read,Trypsin/pharmacology
Laser
Mass
Matrix-Assisted
Sequence
Sequence,Bacillus,Bacillus
Specificity,Spectrometry
Topic,Flagellin/chemistry,Ions,Molecular
anthracis/metabolism,Bacillus
as
cereus/metabolism,Bacillus
subtilis/metabolism,Bacteria/cytology/*metabolism,Databases
AcidAminoData,Peptides/chemistry,Proteins/chemistry,Proteome,Proteomics/*methods,Ribosomes/metabolism,SpeciesDesorption-Ionization/*methods,TimeFactors,to_read,Trypsin/pharmacologyLaserMassMatrix-AssistedSequenceSequence,Bacillus,BacillusSpecificity,SpectrometryTopic,Flagellin/chemistry,Ions,Molecularanthracis/metabolism,Bacillusascereus/metabolism,Bacillussubtilis/metabolism,Bacteria/cytology/*metabolism,Databases
(0)
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1Kazal-Type Inhibitors in the Stomach of Panstrongylus Megistus (Triatominae, Reduviidae).
C. Meiser, H. Piechura, T. Werner, S. Dittmeyer-Schäfer, H. Meyer, B. Warscheid, G. Schaub, and C. Balczun. Insect biochemistry and molecular biology, 40 (4): 345--353 (April 2010)
6 months ago by @warscheidlab
show all tags
&
Acid
Amino
Coagulation
Data,Molecular
Desorption-Ionization,to_read
Frames,Panstrongylus/genetics/*metabolism,Serine
Gel
Inhibitors/genetics/isolation
Laser
Mass
Matrix-Assisted
Mucosa/metabolism,Humans,Insect
Proteinase
Proteins/genetics/*metabolism,Molecular
Reading
Sequence
Sequence,Animals,Blood
Tests,Electrophoresis
Two-Dimensional,Gastric
Weight,Open
purification/*metabolism,Spectrometry
&AcidAminoCoagulationData,MolecularDesorption-Ionization,to_readFrames,Panstrongylus/genetics/*metabolism,SerineGelInhibitors/genetics/isolationLaserMassMatrix-AssistedMucosa/metabolism,Humans,InsectProteinaseProteins/genetics/*metabolism,MolecularReadingSequenceSequence,Animals,BloodTests,ElectrophoresisTwo-Dimensional,GastricWeight,Openpurification/*metabolism,Spectrometry
(0)
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1Psb27, a Cyanobacterial Lipoprotein, Is Involved in the Repair Cycle of Photosystem II.
M. Nowaczyk, R. Hebeler, E. Schlodder, H. Meyer, B. Warscheid, and M. Rögner. The Plant cell, 18 (11): 3121--3131 (November 2006)
6 months ago by @warscheidlab
show all tags
&
Acid
Agents/metabolism,Chromatography
Amino
Biological,Molecular
Complex/analysis/isolation
Data,Nickel/isolation
Exchange,Cyanobacteria/*metabolism/radiation
Gel,Histidine,Light,Lipoproteins/chemistry/*metabolism,Mass
II
Ion
Isotopes,Oligopeptides,Peptides/chemistry,Photosystem
Polyacrylamide
Post-Translational/radiation
Processing
Protein
Proteins/chemistry/*metabolism,Chelating
Sequence
Sequence,Bacterial
Spectrometry,Models
Subunits/chemistry,to_read
effects,Electrophoresis
effects,Protein
purification,Nitrogen
purification/*metabolism,Protein
&AcidAgents/metabolism,ChromatographyAminoBiological,MolecularComplex/analysis/isolationData,Nickel/isolationExchange,Cyanobacteria/*metabolism/radiationGel,Histidine,Light,Lipoproteins/chemistry/*metabolism,MassIIIonIsotopes,Oligopeptides,Peptides/chemistry,PhotosystemPolyacrylamidePost-Translational/radiationProcessingProteinProteins/chemistry/*metabolism,ChelatingSequenceSequence,BacterialSpectrometry,ModelsSubunits/chemistry,to_readeffects,Electrophoresiseffects,Proteinpurification,Nitrogenpurification/*metabolism,Protein
(0)
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1MITRAC7 Acts as a COX1-Specific Chaperone and Reveals a Checkpoint during Cytochrome c Oxidase Assembly.
S. Dennerlein, S. Oeljeklaus, D. Jans, C. Hellwig, B. Bareth, S. Jakobs, M. Deckers, B. Warscheid, and P. Rehling. Cell reports, 12 (10): 1644--1655 (September 2015)
6 months ago by @warscheidlab
show all tags
Acid
Amino
Cells,Humans,Membrane
Chaperones/*physiology,Molecular
Complex
Data,Protein
IV/*metabolism,Enzyme
Line
Membranes/metabolism,Mitochondrial
Multimerization,Protein
Proteins/metabolism/*physiology,Mitochondrial
Proteins/metabolism/*physiology,Molecular
Sequence
Sequence,Cell
Stability,HEK293
Subunits/metabolism,Protein
Transport
Transport,to_read
Tumor,Electron
AcidAminoCells,Humans,MembraneChaperones/*physiology,MolecularComplexData,ProteinIV/*metabolism,EnzymeLineMembranes/metabolism,MitochondrialMultimerization,ProteinProteins/metabolism/*physiology,MitochondrialProteins/metabolism/*physiology,MolecularSequenceSequence,CellStability,HEK293Subunits/metabolism,ProteinTransportTransport,to_readTumor,Electron
(0)
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1A Bacterial Toxin Catalyzing Tyrosine Glycosylation of Rho and Deamidation of Gq and Gi Proteins.
T. Jank, X. Bogdanović, C. Wirth, E. Haaf, M. Spoerner, K. Böhmer, M. Steinemann, J. Orth, H. Kalbitzer, B. Warscheid and 2 other author(s). Nature structural & molecular biology, 20 (11): 1273--1280 (November 2013)
6 months ago by @warscheidlab
show all tags
Acid
Amino
Conformation,rho
Data,Photorhabdus/*enzymology,Protein
Diphosphate
GTP-Binding
Molecular,Molecular
N-Acetylglucosamine/*chemistry/*metabolism
Proteins/*metabolism,to_read,Tyrosine/*metabolism,Uridine
Resonance
Sequence
Sequence,Animals,Bacterial
Spectroscopy,Models
Toxins/*chemistry/*metabolism,Crystallography
X-Ray,Glycosylation,Humans,Magnetic
AcidAminoConformation,rhoData,Photorhabdus/*enzymology,ProteinDiphosphateGTP-BindingMolecular,MolecularN-Acetylglucosamine/*chemistry/*metabolismProteins/*metabolism,to_read,Tyrosine/*metabolism,UridineResonanceSequenceSequence,Animals,BacterialSpectroscopy,ModelsToxins/*chemistry/*metabolism,CrystallographyX-Ray,Glycosylation,Humans,Magnetic
(0)
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1MALDI Analysis of Bacilli in Spore Mixtures by Applying a Quadrupole Ion Trap Time-of-Flight Tandem Mass Spectrometer.
B. Warscheid, K. Jackson, C. Sutton, and C. Fenselau. Analytical chemistry, 75 (20): 5608--5617 (October 2003)
6 months ago by @warscheidlab
show all tags
&
Acid
Acid/chemistry,Trypsin/chemistry/metabolism
Amino
Bacterial/chemistry/*isolation
Data,Molecular
Desorption-Ionization/*methods,Spores
Fragments/analysis,Spectrometry
Laser
Mass
Matrix-Assisted
Protein,Molecular
Proteins/chemistry/metabolism,Databases
Sequence
Sequence,Bacillus
Weight,Peptide
cereus/chemistry/isolation
purification,Bacillus
purification,Bacillus/chemistry/*isolation
purification,Bacterial
purification,to_read,Trifluoroacetic
subtilis/chemistry/isolation
thuringiensis/chemistry/isolation
&AcidAcid/chemistry,Trypsin/chemistry/metabolismAminoBacterial/chemistry/*isolationData,MolecularDesorption-Ionization/*methods,SporesFragments/analysis,SpectrometryLaserMassMatrix-AssistedProtein,MolecularProteins/chemistry/metabolism,DatabasesSequenceSequence,BacillusWeight,Peptidecereus/chemistry/isolationpurification,Bacilluspurification,Bacillus/chemistry/*isolationpurification,Bacterialpurification,to_read,Trifluoroaceticsubtilis/chemistry/isolationthuringiensis/chemistry/isolation
(0)
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1Coa3 and Cox14 Are Essential for Negative Feedback Regulation of COX1 Translation in Mitochondria.
D. Mick, M. Vukotic, H. Piechura, H. Meyer, B. Warscheid, M. Deckers, and P. Rehling. The Journal of cell biology, 191 (1): 141--154 (October 2010)
6 months ago by @warscheidlab
show all tags
Acid
Alignment,to_read,Transcription
Amino
Biosynthesis,Saccharomyces
Complex
Data,Protein
Expression
Factors/chemistry/metabolism/*physiology
IV/metabolism,Feedback
Physiological,Gene
Proteins/chemistry/metabolism/*physiology,Saccharomyces
Proteins/metabolism/*physiology,Mitochondria/*metabolism,Mitochondrial
Proteins/metabolism/*physiology,Molecular
Regulation,Membrane
Sequence
Sequence,Electron
Transport
cerevisiae
cerevisiae/*metabolism/ultrastructure,Sequence
AcidAlignment,to_read,TranscriptionAminoBiosynthesis,SaccharomycesComplexData,ProteinExpressionFactors/chemistry/metabolism/*physiologyIV/metabolism,FeedbackPhysiological,GeneProteins/chemistry/metabolism/*physiology,SaccharomycesProteins/metabolism/*physiology,Mitochondria/*metabolism,MitochondrialProteins/metabolism/*physiology,MolecularRegulation,MembraneSequenceSequence,ElectronTransportcerevisiaecerevisiae/*metabolism/ultrastructure,Sequence
(0)
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1New Dimensions in the Study of Protein Complexes Using Quantitative Mass Spectrometry.
S. Oeljeklaus, H. Meyer, and B. Warscheid. FEBS letters, 583 (11): 1674--1683 (June 2009)
6 months ago by @warscheidlab
show all tags
Acid
Amino
Data,Proteins/*chemistry,Proteomics,to_read
Sequence
Sequence,Mass
Spectrometry/*methods,Molecular
AcidAminoData,Proteins/*chemistry,Proteomics,to_readSequenceSequence,MassSpectrometry/*methods,Molecular
(0)
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1Structural Insights into Ca2+-Calmodulin Regulation of Plectin 1a-Integrin $B$4 Interaction in Hemidesmosomes.
J. Song, J. Kostan, F. Drepper, B. Knapp, E. de Almeida Ribeiro, P. Konarev, I. Grishkovskaya, G. Wiche, M. Gregor, D. Svergun and 2 other author(s). Structure (London, England : 1993), 23 (3): 558--570 (March 2015)
6 months ago by @warscheidlab
show all tags
Acid
Amino
Binding,Protein
Data,Plectin/*chemistry,Protein
Domains
Hydrophilic
Interaction
Interactions,Integrin
Line
Molecular,Molecular
Motifs,Protein
Sequence
Sequence,Animals,Calmodulin/*chemistry,Cell
Structure
Tertiary,Rats,to_read
Tumor,Crystallography
X-Ray,Hemidesmosomes/*chemistry,Humans,Hydrophobic
and
beta4/*chemistry,Mice,Models
AcidAminoBinding,ProteinData,Plectin/*chemistry,ProteinDomainsHydrophilicInteractionInteractions,IntegrinLineMolecular,MolecularMotifs,ProteinSequenceSequence,Animals,Calmodulin/*chemistry,CellStructureTertiary,Rats,to_readTumor,CrystallographyX-Ray,Hemidesmosomes/*chemistry,Humans,Hydrophobicandbeta4/*chemistry,Mice,Models
(0)
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1Characterization of Bacillus Spore Species and Their Mixtures Using Postsource Decay with a Curved-Field Reflectron.
B. Warscheid, and C. Fenselau. Analytical chemistry, 75 (20): 5618--5627 (October 2003)
6 months ago by @warscheidlab
show all tags
&
Acid
Acid/chemistry,Trypsin/chemistry/metabolism
Amino
Bacterial/chemistry/*isolation
Data,Molecular
Desorption-Ionization/*methods,Spores
Fragments/analysis,Spectrometry
Laser
Mass
Matrix-Assisted
Protein,Molecular
Proteins/chemistry/metabolism,Databases
Sequence
Sequence,Bacillus
Weight,Peptide
anthracis/chemistry/isolation
cereus/chemistry/isolation
purification,Bacillus
purification,Bacillus/chemistry/*isolation
purification,Bacterial
purification,to_read,Trifluoroacetic
subtilis/chemistry/isolation
thuringiensis/chemistry/isolation
&AcidAcid/chemistry,Trypsin/chemistry/metabolismAminoBacterial/chemistry/*isolationData,MolecularDesorption-Ionization/*methods,SporesFragments/analysis,SpectrometryLaserMassMatrix-AssistedProtein,MolecularProteins/chemistry/metabolism,DatabasesSequenceSequence,BacillusWeight,Peptideanthracis/chemistry/isolationcereus/chemistry/isolationpurification,Bacilluspurification,Bacillus/chemistry/*isolationpurification,Bacterialpurification,to_read,Trifluoroaceticsubtilis/chemistry/isolationthuringiensis/chemistry/isolation
(0)
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8Structure and Function of TPC1 Vacuole SV Channel Gains Shape
R. Hedrich, T. Mueller, D. Becker, and I. Marten. Mol Plant, 11 (6): 764-775 (2018)Hedrich, Rainer Mueller, Thomas D Becker, Dirk Marten, Irene eng Research Support, Non-U.S. Gov't Review England 2018/04/04 Mol Plant. 2018 Jun 4;11(6):764-775. doi: 10.1016/j.molp.2018.03.017. Epub 2018 Mar 31..
9 months ago by @jvsi_all
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Acid
Amino
Sequence
myOwn
AcidAminoSequencemyOwn
(0)
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1Computational Analysis of RNA Nucleotide Sequences
S. Garg. International Journal of Trend in Scientific Research and Development, 3 (2): 369-372 (February 2019)
6 years ago by @ijtsrd
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Amino
Codon
Gene
Nucleotide
Protein
RNA
Sequence
acid
AminoCodonGeneNucleotideProteinRNASequenceacid
(0)
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1Solid-state \NMR\ studies of the membrane-bound closed state of the colicin \E\1 channel domain in lipid bilayers
Y. Kim, K. Valentine, S. Opella, S. Schendel, and W. Cramer. Protein Sci., 7 (2): 342--348 (February 1998)
8 years ago by @nmrresource
show all tags
Acid
Amino
Data,Phospholipids
Proteins,Molecular
Resonance
Sequence
Sequence,Colicins,Lipid
Spectroscopy,Membrane
bilayers,Magnetic
AcidAminoData,PhospholipidsProteins,MolecularResonanceSequenceSequence,Colicins,LipidSpectroscopy,Membranebilayers,Magnetic
(0)
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1Dilute spin-exchange assignment of solid-state \NMR\ spectra of oriented proteins: acetylcholine \M\2 in bilayers
F. Marassi, J. Gesell, A. Valente, Y. Kim, M. Oblatt-Montal, M. Montal, and S. Opella. J. Biomol. NMR, 14 (2): 141--148 (June 1999)
8 years ago by @nmrresource
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Acid
Amino
Conformation,Receptor,Receptors
Data,Muscarinic,Muscarinic
Fragments,Protein
Isotopes,Nuclear
M2,Nitrogen
Magnetic
Resonance,Peptide
Sequence
Sequence,Biomolecular,Lipid
bilayers,Molecular
AcidAminoConformation,Receptor,ReceptorsData,Muscarinic,MuscarinicFragments,ProteinIsotopes,NuclearM2,NitrogenMagneticResonance,PeptideSequenceSequence,Biomolecular,Lipidbilayers,Molecular
(0)
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1Orientations of amphipathic helical peptides in membrane bilayers determined by solid-state \NMR\ spectroscopy
B. Bechinger, Y. Kim, L. Chirlian, J. Gesell, J. Neumann, M. Montal, J. Tomich, M. Zasloff, and S. Opella. J. Biomol. NMR, 1 (2): 167--173 (July 1991)
8 years ago by @nmrresource
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Acid
Amino
Cationic
Channels,Lipid
Conformation,Molecular
Data,Nicotinic,Peptide
Fragments,Peptides,Receptors,Xenopus
Lipids,Membrane
Peptides,Ion
Proteins
Proteins,Molecular
Resonance
Sequence
Sequence,Antimicrobial
Spectroscopy,Membrane
bilayers,Magainins,Magnetic
AcidAminoCationicChannels,LipidConformation,MolecularData,Nicotinic,PeptideFragments,Peptides,Receptors,XenopusLipids,MembranePeptides,IonProteinsProteins,MolecularResonanceSequenceSequence,AntimicrobialSpectroscopy,Membranebilayers,Magainins,Magnetic
(0)
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1Structural basis of the temperature transition of \Pf\1 bacteriophage
D. Thiriot, A. Nevzorov, and S. Opella. Protein Sci., 14 (4): 1064--1070 (April 2005)
8 years ago by @nmrresource
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Acid
Amino
Data,Nuclear
Magnetic
Proteins,Molecular
Resonance,Temperature
Sequence
Sequence,Biomolecular,Capsid
AcidAminoData,NuclearMagneticProteins,MolecularResonance,TemperatureSequenceSequence,Biomolecular,Capsid
(0)
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1Two-dimensional 1H \NMR\ experiments show that the 23-residue magainin antibiotic peptide is an alpha-helix in dodecylphosphocholine micelles, sodium dodecylsulfate micelles, and trifluoroethanol/water solution
J. Gesell, M. Zasloff, and S. Opella. J. Biomol. NMR, 9 (2): 127--135 (February 1997)
8 years ago by @nmrresource
show all tags
Acid
Agents,Antimicrobial
Amino
Cationic
Data,Peptides,Phosphorylcholine,Protein
Dodecyl
Peptides,Deuterium,Hydrogen,Magainins,Magnetic
Proteins
Resonance
Sequence
Sequence,Anti-Infective
Spectroscopy,Micelles,Models,Molecular,Molecular
Structure,Secondary,Sodium
Sulfate,Solutions,Trifluoroethanol,Water,Xenopus
AcidAgents,AntimicrobialAminoCationicData,Peptides,Phosphorylcholine,ProteinDodecylPeptides,Deuterium,Hydrogen,Magainins,MagneticProteinsResonanceSequenceSequence,Anti-InfectiveSpectroscopy,Micelles,Models,Molecular,MolecularStructure,Secondary,SodiumSulfate,Solutions,Trifluoroethanol,Water,Xenopus
(0)
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1Impact of histidine residues on the transmembrane helices of viroporins
Y. Wang, S. Park, Y. Tian, and S. Opella. Mol. Membr. Biol., 30 (7): 360--369 (November 2013)
8 years ago by @nmrresource
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A
Accessory
Acid
Amino
Data,Nuclear
Immunodeficiency
Magnetic
Matrix
Motifs,Amino
Mutation,Protein
Proteins
Proteins,Influenza
Proteins,Molecular
Proteins,Viral
Regulatory
Resonance,Point
Sequence
Sequence,Biomolecular,HIV-1,Histidine,Human
Structure,Secondary,Viral
Virus
and
virus,Membrane
AAccessoryAcidAminoData,NuclearImmunodeficiencyMagneticMatrixMotifs,AminoMutation,ProteinProteinsProteins,InfluenzaProteins,MolecularProteins,ViralRegulatoryResonance,PointSequenceSequence,Biomolecular,HIV-1,Histidine,HumanStructure,Secondary,ViralVirusandvirus,Membrane
(0)
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1Complete resolution of the solid-state \NMR\ spectrum of a uniformly 15N-labeled membrane protein in phospholipid bilayers
F. Marassi, A. Ramamoorthy, and S. Opella. Proc. Natl. Acad. Sci. U.S.A., 94 (16): 8551--8556 (August 1997)
8 years ago by @nmrresource
show all tags
Acid
Amino
Binding
Data,Phospholipids,Protein
Proteins,Molecular
Resonance
Sequence
Sequence,Escherichia
Spectroscopy,Membrane
bilayers,Magnetic
coli,Lipid
AcidAminoBindingData,Phospholipids,ProteinProteins,MolecularResonanceSequenceSequence,EscherichiaSpectroscopy,Membranebilayers,Magneticcoli,Lipid
(0)
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1Structures of the \M\2 channel-lining segments from nicotinic acetylcholine and \NMDA\ receptors by \NMR\ spectroscopy
S. Opella, F. Marassi, J. Gesell, A. Valente, Y. Kim, M. Oblatt-Montal, and M. Montal. Nat. Struct. Biol., 6 (4): 374--379 (April 1999)
8 years ago by @nmrresource
show all tags
Acid
Amino
Channel
Channels,Isotope
Conformation,Receptors,Recombinant
Data,N-Methyl-D-Aspartate,Nicotinic,Peptide
Fragments,Protein
Gating,Ion
Labeling,Lipid
Proteins,Solutions
Resonance
Sequence
Sequence,Chemical,Escherichia
Spectroscopy,Micelles,Models,Molecular,Molecular
bilayers,Lipids,Magnetic
coli,Ion
AcidAminoChannelChannels,IsotopeConformation,Receptors,RecombinantData,N-Methyl-D-Aspartate,Nicotinic,PeptideFragments,ProteinGating,IonLabeling,LipidProteins,SolutionsResonanceSequenceSequence,Chemical,EscherichiaSpectroscopy,Micelles,Models,Molecular,Molecularbilayers,Lipids,Magneticcoli,Ion
(0)
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1A Targeted Proteomics Approach to the Rapid Identification of Bacterial Cell Mixtures by Matrix-Assisted Laser Desorption/Ionization Mass Spectrometry.

1Kazal-Type Inhibitors in the Stomach of Panstrongylus Megistus (Triatominae, Reduviidae).

1Psb27, a Cyanobacterial Lipoprotein, Is Involved in the Repair Cycle of Photosystem II.

1MITRAC7 Acts as a COX1-Specific Chaperone and Reveals a Checkpoint during Cytochrome c Oxidase Assembly.

1A Bacterial Toxin Catalyzing Tyrosine Glycosylation of Rho and Deamidation of Gq and Gi Proteins.

1MALDI Analysis of Bacilli in Spore Mixtures by Applying a Quadrupole Ion Trap Time-of-Flight Tandem Mass Spectrometer.

1Coa3 and Cox14 Are Essential for Negative Feedback Regulation of COX1 Translation in Mitochondria.

1New Dimensions in the Study of Protein Complexes Using Quantitative Mass Spectrometry.

1Structural Insights into Ca2+-Calmodulin Regulation of Plectin 1a-Integrin $B$4 Interaction in Hemidesmosomes.

1Characterization of Bacillus Spore Species and Their Mixtures Using Postsource Decay with a Curved-Field Reflectron.

8Structure and Function of TPC1 Vacuole SV Channel Gains Shape

1Computational Analysis of RNA Nucleotide Sequences

1Solid-state \NMR\ studies of the membrane-bound closed state of the colicin \E\1 channel domain in lipid bilayers

1Dilute spin-exchange assignment of solid-state \NMR\ spectra of oriented proteins: acetylcholine \M\2 in bilayers

1Orientations of amphipathic helical peptides in membrane bilayers determined by solid-state \NMR\ spectroscopy

1Structural basis of the temperature transition of \Pf\1 bacteriophage

1Two-dimensional 1H \NMR\ experiments show that the 23-residue magainin antibiotic peptide is an alpha-helix in dodecylphosphocholine micelles, sodium dodecylsulfate micelles, and trifluoroethanol/water solution

1Impact of histidine residues on the transmembrane helices of viroporins

1Complete resolution of the solid-state \NMR\ spectrum of a uniformly 15N-labeled membrane protein in phospholipid bilayers

1Structures of the \M\2 channel-lining segments from nicotinic acetylcholine and \NMDA\ receptors by \NMR\ spectroscopy

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