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An approximate full-likelihood method for inferring selection and allele frequency trajectories from DNA sequence data

, , and . bioRxiv, (2019)
DOI: 10.1101/592675

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Detecting coevolving amino acid sites using Bayesian mutational mapping., , , and . ISMB (Supplement of Bioinformatics), page 126-135. (2005)Identification of physicochemical selective pressure on protein encoding nucleotide sequences., , and . BMC Bioinform., (2006)Dependence of paracentric inversion rate on tract length., , and . BMC Bioinform., (2007)137 ancient human genomes from across the Eurasian steppes, , , , , , , , , and 65 other author(s). Nature, 557 (7705): 369--374 (2018)A metagenome-wide association study of gut microbiota in type 2 diabetes, , , , , , , , , and 46 other author(s). Nature, 490 (7418): 55--60 (Oct 4, 2012)Distinguishing between Selective Sweeps from Standing Variation and from a De Novo Mutation, , and . PLoS Genet, 8 (10): e1003011 (October 2012)SCONCE: a method for profiling copy number alterations in cancer evolution using single-cell whole genome sequencing., and . Bioinform., 38 (7): 1801-1808 (2022)A Draft Sequence of the Neandertal Genome, , , , , , , , , and 46 other author(s). Science, 328 (5979): 710-722 (2010)Estimating IBD tracts from low coverage NGS data., , and . Bioinform., 32 (14): 2096-2102 (2016)An architectural blueprint for a Real-World Internet, , , , , , , , , and . The Future Internet Assembly, page 67--80. Springer, Berlin, Heidelberg, (2011)