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Binding Site Identification and Flexible Docking of Single Stranded RNA to Proteins Using a Fragment-Based Approach., , and . PLoS Comput. Biol., (2016)Molecular dynamics simulations on the free and complexed N-terminal SH2 domain of SHP-2., , and . In Silico Biology, 2 (3): 305-311 (2002)Rapid approximate calculation of water binding free energies in the whole hydration domain of (bio)macromolecules., and . J. Comput. Chem., 37 (18): 1711-1724 (2016)Efficient inclusion of receptor flexibility in grid-based protein-ligand docking., and . J. Comput. Chem., 32 (16): 3433-3439 (2011)Explicit solvent repulsive scaling replica exchange molecular dynamics (RS-REMD) in molecular modeling of protein-glycosaminoglycan complexes., , , , , and . J. Comput. Chem., 43 (24): 1633-1640 (2022)Update of the ATTRACT force field for the prediction of protein-protein binding affinity., , , and . J. Comput. Chem., 38 (21): 1887-1890 (2017)The tL structure within the leader region of Escherichia coli ribosomal RNA operons has post-transcriptional functions., , , , and . Nucleic Acids Res., 18 (13): 3893-3901 (1990)Modeling large protein-glycosaminoglycan complexes using a fragment-based approach., , and . J. Comput. Chem., 40 (14): 1429-1439 (2019)Fast and accurate grid representations for atom-based docking with partner flexibility., and . J. Comput. Chem., 38 (17): 1538-1546 (2017)Evaluation of replica exchange with repulsive scaling approach for docking glycosaminoglycans., , , , , and . J. Comput. Chem., 42 (15): 1040-1053 (2021)