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Pan-cancer analysis of whole genomes identifies driver rearrangements promoted by LINE-1 retrotransposition

B. Rodriguez-Martin, E. Alvarez, A. Baez-Ortega, J. Zamora, F. Supek, J. Demeulemeester, M. Santamarina, Y. Ju, J. Temes, D. Garcia-Souto, H. Detering, Y. Li, J. Rodriguez-Castro, A. Dueso-Barroso, A. Bruzos, S. Dentro, M. Blanco, G. Contino, D. Ardeljan, M. Tojo, N. Roberts, S. Zumalave, P. Edwards, J. Weischenfeldt, M. Puiggròs, Z. Chong, K. Chen, E. Lee, J. Wala, K. Raine, A. Butler, S. Waszak, F. Navarro, S. Schumacher, J. Monlong, F. Maura, N. Bolli, G. Bourque, M. Gerstein, P. Park, D. Wedge, R. Beroukhim, D. Torrents, J. Korbel, I. Martincorena, R. Fitzgerald, P. Van Loo, H. Kazazian, K. Burns, K. Akdemir, E. Alvarez, A. Baez-Ortega, R. Beroukhim, P. Boutros, D. Bowtell, B. Brors, K. Burns, P. Campbell, K. Chan, K. Chen, I. Cortés-Ciriano, A. Dueso-Barroso, A. Dunford, P. Edwards, X. Estivill, D. Etemadmoghadam, L. Feuerbach, J. Fink, M. Frenkel-Morgenstern, D. Garsed, M. Gerstein, D. Gordenin, D. Haan, J. Haber, J. Hess, B. Hutter, M. Imielinski, D. Jones, Y. Ju, M. Kazanov, L. Klimczak, Y. Koh, J. Korbel, K. Kumar, E. Lee, J. Lee, Y. Li, A. Lynch, G. Macintyre, F. Markowetz, I. Martincorena, A. Martinez-Fundichely, M. Meyerson, S. Miyano, H. Nakagawa, F. Navarro, S. Ossowski, P. Park, J. Pearson, M. Puiggròs, K. Rippe, N. Roberts, S. Roberts, B. Rodriguez-Martin, S. Schumacher, R. Scully, M. Shackleton, N. Sidiropoulos, L. Sieverling, C. Stewart, D. Torrents, J. Tubio, I. Villasante, N. Waddell, J. Wala, J. Weischenfeldt, L. Yang, X. Yao, S. Yoon, J. Zamora, C. Zhang, P. Campbell, J. Tubio, P. Group, and P. Consortium. Nature Genetics, (2020)
DOI: 10.1038/s41588-019-0562-0

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Jan Oliver Korbel

Jan o ta

Karlhans Körbel

Anja Körbel

Wilhelm Körbel

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Pan-cancer analysis of whole genomes identifies driver rearrangements promoted by LINE-1 retrotranspositionB. Rodriguez-Martin, E. Alvarez, A. Baez-Ortega, J. Zamora, F. Supek, J. Demeulemeester, M. Santamarina, Y. Ju, J. Temes, D. Garcia-Souto and 115 other author(s). Nature Genetics, (2020)Comprehensive characterization of complex structural variations in cancer by directly comparing genome sequence readsV. Moncunill, S. Gonzalez, S. Bea, L. Andrieux, I. Salaverria, C. Royo, L. Martinez, M. Puiggros, M. Segura-Wang, A. Stutz and 10 other author(s). Nature Biotechnology, 32 (11): 1106--1112 (Oct 26, 2014)Data analysis: Create a cloud commons.L. Stein, B. Knoppers, P. Campbell, G. Getz, and J. Korbel. Nature, 523 (7559): 149-151 (2015)VISOR: a versatile haplotype-aware structural variant simulator for short- and long-read sequencing.D. Bolognini, A. Sanders, J. Korbel, A. Magi, V. Benes, and T. Rausch. Bioinform., 36 (4): 1267-1269 (2020)Alfred: interactive multi-sample BAM alignment statistics, feature counting and feature annotation for long- and short-read sequencing.T. Rausch, M. Fritz, J. Korbel, and V. Benes. Bioinform., 35 (14): 2489-2491 (2019)ASHLEYS: automated quality control for single-cell Strand-seq data.C. Gros, A. Sanders, J. Korbel, T. Marschall, and P. Ebert. Bioinform., 37 (19): 3356-3357 (2021)Recurrent somatic alterations of FGFR1 and NTRK2 in pilocytic astrocytoma.D. Jones, B. Hutter, N. Jäger, A. Korshunov, M. Kool, H. Warnatz, T. Zichner, S. Lambert, M. Ryzhova, D. Quang and 66 other author(s). Nat Genet, 45 (8): 927--932 (August 2013)Recurrent mutation of the ID3 gene in Burkitt lymphoma identified by integrated genome, exome and transcriptome sequencing.J. Richter, M. Schlesner, S. Hoffmann, M. Kreuz, E. Leich, B. Burkhardt, M. Rosolowski, O. Ammerpohl, R. Wagener, S. Bernhart and 46 other author(s). Nat Genet, 44 (12): 1316--1320 (December 2012)Enhancer hijacking activates GFI1 family oncogenes in medulloblastoma.P. Northcott, C. Lee, T. Zichner, A. Stütz, S. Erkek, D. Kawauchi, D. Shih, V. Hovestadt, M. Zapatka, D. Sturm and 69 other author(s). Nature, 511 (7510): 428--434 (July 2014)Systematic discovery of analogous enzymes in thiamin biosynthesis.E. Morett, J. Korbel, E. Rajan, G. Saab-Rincon, L. Olvera, M. Olvera, S. Schmidt, B. Snel, and P. Bork. Nature biotechnology, 21 (7): 790--795 (July 2003)

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Disambiguation of "Korbel, Jan O."

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Pan-cancer analysis of whole genomes identifies driver rearrangements promoted by LINE-1 retrotransposition

Please choose a person to relate this publication to

Jan Oliver Korbel

Jan o ta

Karlhans Körbel

Anja Körbel

Wilhelm Körbel

Other publications of authors with the same name

Disambiguation

BibSonomy

Disambiguation of "Korbel, Jan O."

copydeleteadd this publication to your clipboardcommunity posthistory of this postURLDOIBibTeXEndNoteAPAChicagoDIN 1505HarvardMSOffice XML Pan-cancer analysis of whole genomes identifies driver rearrangements promoted by LINE-1 retrotransposition

Please choose a person to relate this publication to

Jan Oliver Korbel

Jan o ta

Karlhans Körbel

Anja Körbel

Wilhelm Körbel

Other publications of authors with the same name

Disambiguation

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Pan-cancer analysis of whole genomes identifies driver rearrangements promoted by LINE-1 retrotransposition