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Predicting protein secondary structure by an ensemble through feature-based accuracy estimation., and . BCB, page 29:1-29:10. ACM, (2020)Parameter advising for multiple sequence alignment., and . BMC Bioinform., 16 (S-2): A3 (2015)Core column prediction for protein multiple sequence alignments., and . Algorithms Mol. Biol., 12 (1): 11:1-11:16 (2017)EMP: execution time measurement protocol for compute-bound programs., , , , , and . Softw. Pract. Exp., 47 (4): 559-597 (2017)Exact and Approximation Algorithms for Sorting by Reversals, with Application to Genome Rearrangement., and . Algorithmica, 13 (1/2): 180-210 (1995)Approximation Algorithms for Multiple Sequence Alignment Under a Fixed Evolutionary Tree., and . Discret. Appl. Math., 88 (1-3): 355-366 (1998)Aligning Alignments., and . CPM, volume 1448 of Lecture Notes in Computer Science, page 189-208. Springer, (1998)Efficient Bounds for Oriented Chromosome Inversion Distance., and . CPM, volume 807 of Lecture Notes in Computer Science, page 307-325. Springer, (1994)Learning Parameter-Advising Sets for Multiple Sequence Alignment., and . IEEE ACM Trans. Comput. Biol. Bioinform., 14 (5): 1028-1041 (2017)Shortest Hyperpaths in Directed Hypergraphs for Reaction Pathway Inference., and . J. Comput. Biol., 30 (11): 1198-1225 (November 2023)