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Module networks revisited: computational assessment and prioritization of model predictions.

, , , , and . Bioinform., 25 (4): 490-496 (2009)

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Comparative analysis of module-based versus direct methods for reverse-engineering transcriptional regulatory networks., , , , and . BMC Syst. Biol., (2009)Validating module network learning algorithms using simulated data., , , , , , , , , and 1 other author(s). BMC Bioinform., (2007)Module networks revisited: computational assessment and prioritization of model predictions., , , , and . Bioinform., 25 (4): 490-496 (2009)Enrichment and aggregation of topological motifs are independent organizational principles of integrated interaction networks, , , and . Molecular Biosystems, 7 (10): 2769-2778 (2011)Comparative Analysis of Bivalent Domains in Mammalian Embryonic Stem Cells., and . IWBBIO (1), volume 9043 of Lecture Notes in Computer Science, page 391-402. Springer, (2015)Mammalian transcriptional hotspots are enriched for tissue specific enhancers near cell type specific highly expressed genes and are predicted to act as transcriptional activator hubs.. BMC Bioinform., (2014)TRES predicts transcription control in embryonic stem cells., , , , and . Bioinform., 30 (20): 2983-2985 (2014)Multi-Species Network Inference Improves Gene Regulatory Network Reconstruction for Early Embryonic Development in Drosophila., , and . J. Comput. Biol., 22 (4): 253-265 (2015)Enrichment and aggregation of topological motifs are independent organizational principles of integrated interaction networks, , and . Mol. BioSyst., 7 (10): 2769--2778 (2011)A promoter-level mammalian expression atlas., , , , , , , , , and 254 other author(s). Nat., 507 (7493): 462-470 (2014)