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A statistical framework for protein quantitation in bottom-up MS-based proteomics., , , , , , , , , and 2 other author(s). Bioinform., 25 (16): 2028-2034 (2009)MultiAlign: a multiple LC-MS analysis tool for targeted omics analysis., , , , , , , , , and 3 other author(s). BMC Bioinform., (2013)Model-driven multi-omic data analysis elucidates metabolic immunomodulators of macrophage activation, , , , , , , , , and 3 other author(s). Molecular Systems Biology, (Jun 26, 2012)Charge Prediction of Lipid Fragments in Mass Spectrometry., , , , and . ICMLA (2), page 186-188. IEEE Computer Society, (2011)978-0-7695-4607-0.Salmonella modulates metabolism during growth under conditions that induce expression of virulence genes., , , , , , , , , and 6 other author(s). Molecular bioSystems, 9 (6): 1522--1534 (Jun 7, 2013)Chespa: Streamlining Expansive Chemical Space Evaluation of Molecular Sets., , , , and . J. Chem. Inf. Model., 60 (12): 6251-6257 (2020)DEIMoS GUI: An Open-Source User Interface for a High-Dimensional Mass Spectrometry Data Processing Tool., , and . J. Chem. Inf. Model., 64 (5): 1419-1424 (March 2024)An initial investigation of accuracy required for the identification of small molecules in complex samples using quantum chemical calculated NMR chemical shifts., , , and . J. Cheminformatics, 14 (1): 64 (2022)BioTransformer 3.0 - a web server for accurately predicting metabolic transformation products., , , , , , , , , and . Nucleic Acids Res., 50 (W1): 115-123 (2022)Improved quality control processing of peptide-centric LC-MS proteomics data., , , , , , , and . Bioinform., 27 (20): 2866-2872 (2011)