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A survey on algorithms to characterize transcription factor binding sites.

, , and . Briefings Bioinform., (May 2023)

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Distance Functions, Clustering Algorithms and Microarray Data Analysis., , and . LION, volume 6073 of Lecture Notes in Computer Science, page 125-138. Springer, (2010)Applications of alignment-free methods in epigenomics., , and . Briefings Bioinform., 15 (3): 419-430 (2014)Multi Layer Analysis. CoRR, (2011)A One Class Classifier for Signal Identification: A Biological Case Study., , and . KES (3), volume 5179 of Lecture Notes in Computer Science, page 747-754. Springer, (2008)A New Multi-Layers Method to Analyze Gene Expression., , , , and . KES (3), volume 4694 of Lecture Notes in Computer Science, page 862-869. Springer, (2007)AmpUMI: design and analysis of unique molecular identifiers for deep amplicon sequencing., , , and . Bioinform., 34 (13): i202-i210 (2018)A methodology to assess the intrinsic discriminative ability of a distance function and its interplay with clustering algorithms for microarray data analysis., , , and . BMC Bioinform., 14 (S-1): S6 (2013)Robust and Scalable Learning of Complex Intrinsic Dataset Geometry via ElPiGraph., , , , , , , , , and . Entropy, 22 (3): 296 (2020)Interval Length Analysis in Multi Layer Model., , and . CIBB, volume 5488 of Lecture Notes in Computer Science, page 114-122. Springer, (2008)A New Feature Selection Methodology for K-mers Representation of DNA Sequences., and . CIBB, volume 8623 of Lecture Notes in Computer Science, page 99-108. Springer, (2014)