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Escherichia coli B2 strains prevalent in inflammatory bowel disease patients have distinct metabolic capabilities that enable colonization of intestinal mucosa.

, , , , , , , , and . BMC Syst. Biol., 12 (1): 66:1-66:10 (2018)

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Genome-scale metabolic reconstructions of multiple Salmonella strains reveal serovar-specific metabolic traits, , , , , , , , , and . Nature Communications, 9 (1): 3771-- (2018)Transcriptional regulation in constraints-based metabolic models of Escherichia coli, and . J. Biol. Chem., (2002)Applications of genome-scale metabolic reconstructions, , and . Mol. Syst. Biol., (2009)Comparison of network-based pathway analysis methods, , , , , and . Trends Biotechnol., (2004)A comprehensive genome-scale reconstruction of Escherichia coli metabolism--2011, , , , , , and . Mol. Syst. Biol., (2011)Basic and applied uses of genome-scale metabolic network reconstructions of Escherichia coli, , and . Mol. Syst. Biol., (2013)Large-Scale Evaluation of In Silico Gene Deletions in Saccharomyces cerevisiae, , , and . OMICS, (2003)Characterization and modelling of interspecies electron transfer mechanisms and microbial community dynamics of a syntrophic association, , , , , , , and . Nature Communications, (Nov 22, 2013)Salmonella modulates metabolism during growth under conditions that induce expression of virulence genes., , , , , , , , , and 6 other author(s). Molecular bioSystems, 9 (6): 1522--1534 (Jun 7, 2013)Characterizing the interplay between multiple levels of organization within bacterial sigma factor regulatory networks., , , , , , , , , and 3 other author(s). Nature communications, (Apr 23, 2013)