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Assembly of long error-prone reads using de Bruijn graphs.

, , , , , and . Proc. Natl. Acad. Sci. USA, 113 (52): E8396-E8405 (2016)

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Finding composite regulatory patterns in DNA sequences., and . ISMB, page 354-363. (2002)Splicing graphs and EST assembly problem., , , , and . ISMB, page 181-188. (2002)To Cut... or Not to Cut (Applications of Comparative Physical Maps in Molecular Evolution)., and . SODA, page 304-313. ACM/SIAM, (1996)De novo identification of repeat families in large genomes., , and . ISMB (Supplement of Bioinformatics), page 351-358. (2005)Reconstructing tumor amplisomes., and . ISMB/ECCB (Supplement of Bioinformatics), page 265-273. (2004)From de Bruijn Graphs to Rectangle Graphs for Genome Assembly., , , and . WABI, volume 7534 of Lecture Notes in Computer Science, page 249-261. Springer, (2012)Towards a Computational Theory of Genome Rearrangements., and . Computer Science Today, volume 1000 of Lecture Notes in Computer Science, Springer, (1995)dipSPAdes: Assembler for Highly Polymorphic Diploid Genomes., , and . RECOMB, volume 8394 of Lecture Notes in Computer Science, page 265-279. Springer, (2014)An Introduction to Bioinformatics Algorithms, and . MIT Press, Cambridge, MA, (2004)DRIMM-Synteny: decomposing genomes into evolutionary conserved segments., and . Bioinform., 26 (20): 2509-2516 (2010)