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Genome-wide discovery of transcriptional modules from DNA sequence and gene expression., , and . ISMB (Supplement of Bioinformatics), page 273-282. (2003)From promoter sequence to expression: a probabilistic framework., , , , and . RECOMB, page 263-272. ACM, (2002)Session Introduction., and . Pacific Symposium on Biocomputing, page 262-263. World Scientific, (2004)Modeling interactions between adjacent nucleosomes improves genome-wide predictions of nucleosome occupancy., and . Bioinform., (2009)In pursuit of design principles of regulatory sequences, and . Nat Rev Genet, 15 (7): 453--468 (Jul 10, 2014)Measurements of the Impact of 3′ End Sequences on Gene Expression Reveal Wide Range and Sequence Dependent Effects., , , , , , , , and . PLoS Comput. Biol., (2013)A Multimodal Dataset of 21, 412 Recorded Nights for Sleep and Respiratory Research., , , , , , , and . CoRR, (2023)Probabilistic discovery of overlapping cellular processes and their regulation., , and . RECOMB, page 167-176. ACM, (2004)Incorporating Nucleosomes into Thermodynamic Models of Transcription Regulation., , and . RECOMB, volume 5541 of Lecture Notes in Computer Science, page 217. Springer, (2009)Widespread Compensatory Evolution Conserves DNA-Encoded Nucleosome Organization in Yeast., , , and . PLoS Comput. Biol., (2010)