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Zooming-in on cancer metabolic rewiring with tissue specific constraint-based models.

, , , , , , , and . Computational biology and chemistry, (June 2016)

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Estimating reaction constants in stochastic biological systems with a multi-swarm PSO running on GPUs., , , , and . GECCO (Companion), page 1421-1422. ACM, (2012)popFBA: tackling intratumour heterogeneity with Flux Balance Analysis., , , , , and . Bioinform., 33 (14): i311-i318 (2017)Tau Leaping Stochastic Simulation Method in P Systems., , , and . Workshop on Membrane Computing, volume 4361 of Lecture Notes in Computer Science, page 298-313. Springer, (2006)A Novel Variant of P Systems for the Modelling and Simulation of Biochemical Systems., , , , and . Workshop on Membrane Computing, volume 5957 of Lecture Notes in Computer Science, page 210-226. Springer, (2009)A metabolic core model elucidates how enhanced utilization of glucose and glutamine, with enhanced glutamine-dependent lactate production, promotes cancer cell growth: The WarburQ effect., , , , , , , , and . PLoS Comput. Biol., (2017)Integration of Single-Cell RNA-Sequencing Data into Flux Balance Cellular Automata., , , , , , , and . CIBB, volume 12313 of Lecture Notes in Computer Science, page 207-215. Springer, (2019)GPRuler: Metabolic gene-protein-reaction rules automatic reconstruction., , and . PLoS Comput. Biol., (2021)Investigating Local Evolutions in Dynamical Probabilistic P Systems., , and . SYNASC, page 440-447. IEEE Computer Society, (2005)Towards Probabilistic Model Checking on P Systems Using PRISM., , , , , and . Workshop on Membrane Computing, volume 4361 of Lecture Notes in Computer Science, page 477-495. Springer, (2006)A GPU-Based Multi-swarm PSO Method for Parameter Estimation in Stochastic Biological Systems Exploiting Discrete-Time Target Series., , , , and . EvoBIO, volume 7246 of Lecture Notes in Computer Science, page 74-85. Springer, (2012)