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Optimal Sequence Alignment using Affine Gap Costs

, and . Bulletin of Mathematical Biology, 48 (5-6): 603--616 (1986)
DOI: 10.1007/BF02462326

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Applications and Statistics for multiple hight-scoring segments in molecular Sequences, and . Proceedings of the National Academy of Sciences of the United States of America (PNAS), (1993)The effectiveness of position- and composition-specific gap costs for protein similarity searches., , , and . ISMB, page 15-23. (2008)Gapped BLAST and PSI-BLAST: a new generation of protein database search programs, , , , , , and . Nucleic acids research, 25 (17): 3389 (1997)Optimal Sequence Alignment using Affine Gap Costs, and . Bulletin of Mathematical Biology, 48 (5-6): 603--616 (1986)The Construction and Use of Log-Odds Substitution Scores for Multiple Sequence Alignment, , , and . PLoS Comput Biol, 6 (7): e1000852+ (Jul 15, 2010)Outlier Detection in BLAST Hits., , and . WABI, volume 88 of LIPIcs, page 23:1-23:11. Schloss Dagstuhl - Leibniz-Zentrum für Informatik, (2017)Initial Cluster Analysis., and . J. Comput. Biol., 25 (2): 121-129 (2018)Methods for Assessing the Statistical Significance of Molecular Sequence Features by Using General Scoring Schemes, and . Proceedings of the National Academy of Sciences of the United States of America, 87 (6): pp. 2264-2268 (1990)Basic local alignment search tool, , , , and . Journal of Molecular Biology, 215 (2): 403--410 (1990)A Gibbs Sampler for the Detection of Subtle Motifs in Multiple Sequences., , , , , and . HICSS (5), page 245-254. IEEE Computer Society, (1994)