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Hidden Markov models in computational biology: applications to protein modeling

. 235, page 1501--1531. (1994)

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Simultaneous Sequence Alignment and Tree Construction Using Hidden Markov Models., and . Pacific Symposium on Biocomputing, page 180-191. (2003)Recent Methods for RNA Modeling Using Stochastic Context-Free Grammars., , , , , , and . CPM, volume 807 of Lecture Notes in Computer Science, page 289-306. Springer, (1994)Using Dirichlet Mixture Priors to Derive Hidden Markov Models for Protein Families., , , , , and . ISMB, page 47-55. AAAI, (1993)Subfamily HMMS in Functional Genomics., , , , and . Pacific Symposium on Biocomputing, World Scientific, (2005)Getting Started in Structural Phylogenomics.. PLoS Comput. Biol., (2010)Ortholog identification in the presence of domain architecture rearrangement., , , and . Briefings Bioinform., 12 (5): 413-422 (2011)Phylogenetic Inference in Protein Superfamilies: Analysis of SH2 Domains.. ISMB, page 165-174. AAAI, (1998)Hidden Markov models in computational biology: applications to protein modeling. 235, page 1501--1531. (1994)SATCHMO-JS: a webserver for simultaneous protein multiple sequence alignment and phylogenetic tree construction, , , , , and . Nucl. Acids Res., 38 (suppl\_2): W29--34 (Jul 1, 2010)The Sequence of the Human Genome, , , , , , , , , and 264 other author(s). Science, 291 (5507): 1304-1351 (2001)