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Applying ontology design patterns to the implementation of relations in GENIA

, , , , , and . Proceedings of the fourth International Symposium for Semantic Mining in Biomedicine, (2010)

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Linguistic and Biological Annotations of Biological Interaction Events., , , , and . LREC, page 1402-1405. European Language Resources Association (ELRA), (2006)Syntax Annotation for the GENIA Corpus., , , and . IJCNLP (companion), Asian Federation of Natural Language Processing, (2005)The GENIA project: corpus-based knowledge acquisition and information extraction from genome research papers., , , , , , , , , and . EACL, page 271-272. The Association for Computer Linguistics, (1999)Linguistic scope-based and biological event-based speculation and negation annotations in the Genia Event and BioScope corpora., , , , and . Semantic Mining in Biomedicine, volume 714 of CEUR Workshop Proceedings, CEUR-WS.org, (2010)Automatic Construction of Predicate-argument Structure Patterns for Biomedical Information Extraction., , , , and . EMNLP, page 284-292. ACL, (2006)Event Extraction for Post-Translational Modifications., , , , and . BioNLP@ACL, page 19-27. Association for Computational Linguistics, (2010)An analysis of gene/protein associations at PubMed scale., , and . J. Biomed. Semant., 2 (S-5): S5 (2011)A Robust Retrieval Engine for Proximal and Structural Search., , , , and . HLT-NAACL, The Association for Computational Linguistics, (2003)Bridging the Gap Between Scope-based and Event-based Negation/Speculation Annotations: A Bridge Not Too Far., , , , and . ExProM@ACL, page 47-56. Association for Computational Linguistics, (2012)brat: a Web-based Tool for NLP-Assisted Text Annotation., , , , , and . EACL, page 102-107. The Association for Computer Linguistics, (2012)