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Prediction of Dynamical Properties of Biochemical Pathways with Graph Neural Networks.

, , , and . BIOINFORMATICS, page 32-43. SCITEPRESS, (2020)

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An alternative to Gillespie’s algorithm for simulating chemical reactions, , and . Computational Methods in Systems Biology (CMSB’05), (2005)Objective/MC: A high-level model checking language - Formalization of the imperative core and translation into PRISM., and . J. Intell. Inf. Syst., 52 (3): 533-571 (2019)Probabilistic Model Checking of Biological Systems with Uncertain Kinetic Rates., , , and . RP, volume 5797 of Lecture Notes in Computer Science, page 64-78. Springer, (2009)A Compositional Semantics of Reaction Systems with Restriction., , , , and . CiE, volume 7921 of Lecture Notes in Computer Science, page 330-339. Springer, (2013)Computing Preimages and Ancestors in Reaction Systems., , , and . TPNC, volume 11324 of Lecture Notes in Computer Science, page 23-35. Springer, (2018)IoT based dynamic Bayesian prediction of crop evapotranspiration in soilless cultivations., , , , , and . Comput. Electron. Agric., (February 2023)Membrane Systems Working in Generating and Accepting Modes: Expressiveness and Encodings., , , and . Int. Conf. on Membrane Computing, volume 6501 of Lecture Notes in Computer Science, page 103-118. Springer, (2010)Formal characterization and efficient verification of a biological robustness property., , and . FormaliSE@ICSE, page 13-18. IEEE, (2021)An intermediate language for the stochastic simulation of biological systems., , , and . Theor. Comput. Sci., 410 (33-34): 3085-3109 (2009)Specialized Predictor for Reaction Systems with Context Properties., , , and . CS&P, volume 1492 of CEUR Workshop Proceedings, page 31-43. CEUR-WS.org, (2015)