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KFinger: Capturing Overlaps Between Long Reads by Using Lyndon Fingerprints.

, , , , , and . IWBBIO (2), volume 13347 of Lecture Notes in Computer Science, page 436-449. Springer, (2022)

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PIntron: a fast method for detecting the gene structure due to alternative splicing via maximal pairings of a pattern and a text., , , , , and . BMC Bioinform., 13 (S-5): S2 (2012)Divide and Conquer Computation of the Multi-string BWT and LCP Array., , , , , and . CiE, volume 10936 of Lecture Notes in Computer Science, page 107-117. Springer, (2018)Character-Based Phylogeny Construction and Its Application to Tumor Evolution., , , and . CiE, volume 10307 of Lecture Notes in Computer Science, page 3-13. Springer, (2017)Can Formal Languages Help Pangenomics to Represent and Analyze Multiple Genomes?, , , , , and . DLT, volume 13257 of Lecture Notes in Computer Science, page 3-12. Springer, (2022)FSG: Fast String Graph Construction for De Novo Assembly of Reads Data., , , , and . ISBRA, volume 9683 of Lecture Notes in Computer Science, page 27-39. Springer, (2016)A New Lightweight Algorithm to compute the BWT and the LCP array of a Set of Strings., , , , and . CoRR, (2016)Can We Replace Reads by Numeric Signatures? Lyndon Fingerprints as Representations of Sequencing Reads for Machine Learning., , , , , , , and . AlCoB, volume 12715 of Lecture Notes in Computer Science, page 16-28. Springer, (2021)A Method to Detect Gene Structure and Alternative Splice Sites by Agreeing ESTs to a Genomic Sequence., , and . WABI, volume 2812 of Lecture Notes in Computer Science, page 63-77. Springer, (2003)Constructing String Graphs in External Memory., , , , and . WABI, volume 8701 of Lecture Notes in Computer Science, page 311-325. Springer, (2014)Reconstructing isoform graphs from RNA-Seq data., , , and . BIBM, page 1-4. IEEE Computer Society, (2012)