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Learning Cellular Sorting Pathways Using Protein Interactions and Sequence Motifs., , and . RECOMB, volume 6577 of Lecture Notes in Computer Science, page 204-221. Springer, (2011)Iterative point set registration for aligning scRNA-seq data., and . PLoS Comput. Biol., (2020)Identifying signaling genes in spatial single-cell expression data., , and . Bioinform., 37 (7): 968-975 (2021)Unsupervised Cell Functional Annotation for Single-Cell RNA-Seq., , and . RECOMB, volume 13278 of Lecture Notes in Computer Science, page 349-352. Springer, (2022)Genome-wide transcriptional analysis of the human cell cycle identifies genes differentially regulated in normal and cancer cells., , , , , , , and . Proc Natl Acad Sci U S A, 105 (3): 955--960 (January 2008)Integrating longitudinal clinical and microbiome data to predict growth faltering in preterm infants., , , , , , , , , and 6 other author(s). J. Biomed. Informatics, (2022)Deriving spatial features from in situ proteomics imaging to enhance cancer survival analysis., , , , , , , , and . Bioinform., 39 (Supplement-1): 140-148 (2023)The human body at cellular resolution: the NIH Human Biomolecular Atlas Program., , , , , , , , , and 114 other author(s). Nat., 574 (7777): 187-192 (2019)CINS: Cell Interaction Network inference from Single cell expression data., , , , , , , , , and . PLoS Comput. Biol., 18 (9): 1010468 (September 2022)Identifying indications for novel drugs using electronic health records., , , , , , , , and . Comput. Biol. Medicine, (2024)