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Designing Efficient SIMD Kernels for High Performance Sequence Alignment.

, , , , , , and . IPDPS Workshops, page 167-176. IEEE, (2023)

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GPU-ArraySort: A Parallel, In-Place Algorithm for Sorting Large Number of Arrays., and . ICPP Workshops, page 78-87. IEEE Computer Society, (2016)Evaluating the potential of disaggregated memory systems for HPC applications., , , , , , , , , and 1 other author(s). Concurr. Comput. Pract. Exp., (August 2024)An Out-of-Core GPU based Dimensionality Reduction Algorithm for Big Mass Spectrometry Data and Its Application in Bottom-up Proteomics., and . BCB, page 550-555. ACM, (2017)GPU-DAEMON: GPU algorithm design, data management & optimization template for array based big omics data., , and . Comput. Biol. Medicine, (2018)Evaluating Performance and Portability of a core bioinformatics kernel on multiple vendor GPUs., , , and . P3HPC@SC, page 68-78. IEEE, (2021)Designing Efficient SIMD Kernels for High Performance Sequence Alignment., , , , , , and . IPDPS Workshops, page 167-176. IEEE, (2023)TANGO: A GPU optimized traceback approach for sequence alignment algorithms., , , and . SC Workshops, page 760-765. ACM, (2023)GPU-PCC: A GPU Based Technique to Compute Pairwise Pearson's Correlation Coefficients for Big fMRI Data., , and . BCB, page 723-728. ACM, (2017)Accelerating large scale de novo metagenome assembly using GPUs., , , , , , , and . SC, page 7. ACM, (2021)