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A spectrum of free software tools for processing the VCF variant call format: vcflib, bio-vcf, cyvcf2, hts-nim and slivar.

, , , , and . PLoS Comput. Biol., (2022)

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A spectrum of free software tools for processing the VCF variant call format: vcflib, bio-vcf, cyvcf2, hts-nim and slivar., , , , and . PLoS Comput. Biol., (2022)Graph-Based Representations for Supporting Genome Data Analysis and Visualization: Opportunities and Challenges., , , , , and . GbRPR, volume 11510 of Lecture Notes in Computer Science, page 237-246. Springer, (2019)Haplotype-aware graph indexes., , , , and . WABI, volume 113 of LIPIcs, page 4:1-4:13. Schloss Dagstuhl - Leibniz-Zentrum für Informatik, (2018)Haplotype-aware graph indexes., , , , and . Bioinform., 36 (2): 400-407 (2020)Unbiased pangenome graphs., and . Bioinform., (January 2023)A Graph Extension of the Positional Burrows-Wheeler Transform and Its Applications., , and . WABI, volume 9838 of Lecture Notes in Computer Science, page 246-256. Springer, (2016)A graph extension of the positional Burrows-Wheeler transform and its applications., , and . Algorithms Mol. Biol., 12 (1): 18:1-18:12 (2017)Superbubbles, Ultrabubbles and Cacti., , , and . RECOMB, volume 10229 of Lecture Notes in Computer Science, page 173-189. (2017)Fast Exact String to D-Texts Alignments., , and . BIOINFORMATICS, page 70-79. SCITEPRESS, (2023)BamTools: a C++ API and toolkit for analyzing and managing BAM files., , , , and . Bioinform., 27 (12): 1691-1692 (2011)