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Motif discovery and motif finding from genome-mapped DNase footprint data., , and . Bioinform., 25 (18): 2318-2325 (2009)ANANASTRA: annotation and enrichment analysis of allele-specific transcription factor binding at SNPs., , , , , , , , , and 3 other author(s). Nucleic Acids Res., 50 (W1): 51-56 (2022)Sequence-based model of gap gene regulatory network, , , and . bioRxiv, (2015)Jaccard index based similarity measure to compare transcription factor binding site models., , and . Algorithms Mol. Biol., (2013)A promoter-level mammalian expression atlas., , , , , , , , , and 254 other author(s). Nat., 507 (7493): 462-470 (2014)svist4get: a simple visualization tool for genomic tracks from sequencing experiments., , , , , and . BMC Bioinform., 20 (1): 113:1-113:6 (2019)LegNet: a best-in-class deep learning model for short DNA regulatory regions., , , , , , , , and . Bioinform., (August 2023)Learning Advanced TFBS Models from Chip-Seq Data - diChIPMunk: Effective Construction of Dinucleotide Positional Weight Matrices., , , , and . BIOINFORMATICS, page 146-150. SciTePress, (2013)PERFECTOS-APE - Predicting Regulatory Functional Effect of SNPs by Approximate P-value Estimation., , , , and . BIOINFORMATICS, page 102-108. SciTePress, (2015)From binding motifs in Chip-seq Data to Improved Models of transcription factor binding Sites., , , , , and . J. Bioinform. Comput. Biol., (2013)