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Accelerating metagenomic read classification on CUDA-enabled GPUs.

, , , and . BMC Bioinform., 18 (1): 11:1-11:10 (2017)

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cuBool: Bit-Parallel Boolean Matrix Factorization on CUDA-Enabled Accelerators., , , , , and . ICPADS, page 465-472. IEEE, (2018)General-purpose GPU hashing data structures and their application in accelerated genomics., , , , , , and . J. Parallel Distributed Comput., (2022)Faster Segmented Sort on GPUs., , , and . Euro-Par, volume 14100 of Lecture Notes in Computer Science, page 664-678. Springer, (2023)Gossip: Efficient Communication Primitives for Multi-GPU Systems., , , and . ICPP, page 63:1-63:10. ACM, (2019)FMapper: Scalable read mapper based on succinct hash index on SunWay TaihuLight., , , , , and . J. Parallel Distributed Comput., (2022)MetaCache-GPU: Ultra-Fast Metagenomic Classification., , , , and . ICPP, page 25:1-25:11. ACM, (2021)SPECTR: Scalable Parallel Short Read Error Correction on Multi-core and Many-core Architectures., , , , , , , and . ICPP, page 39:1-39:10. ACM, (2018)Accelerating bioinformatics applications on CUDA-enabled multi-GPU systems.. University of Mainz, Germany, (2023)A big data approach to metagenomics for all-food-sequencing., , , , , , , , and . BMC Bioinform., 21 (1): 102 (2020)Accelerating metagenomic read classification on CUDA-enabled GPUs., , , and . BMC Bioinform., 18 (1): 11:1-11:10 (2017)