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Assembly independent functional annotation of short-read data using SOFA: Short-ORF functional annotation., , , , and . CIBCB, page 1-6. IEEE, (2015)FAST: Fast annotation with synchronized threads., , , , and . CIBCB, page 1-8. IEEE, (2016)Metabolic pathways for the whole community, , , , , and . BMC Genomics, 15 (1): 619+ (Jul 22, 2014)TreeSAPP: the Tree-based Sensitive and Accurate Phylogenetic Profiler., , , , , and . Bioinform., 36 (18): 4706-4713 (2020)An integrated, modular approach to data science education in microbiology., , , , , , and . PLoS Comput. Biol., (2021)Relabeling Metabolic Pathway Data with Groups to Improve Prediction Outcomes., and . ICCABS, volume 13254 of Lecture Notes in Computer Science, page 38-50. Springer International Publishing, (2021)Scalable heuristics for clustering biological graphs., , , and . ICCABS, page 1-6. IEEE Computer Society, (2013)Metabolic Pathway Prediction using Non-negative Matrix Factorization with Improved Precision., , and . ICCABS, volume 12686 of Lecture Notes in Computer Science, page 33-44. Springer, (2020)Expanding the boundaries of local similarity analysis., , , and . BMC Genomics, 14 (S-1): S3 (2013)FragGeneScan-plus for scalable high-throughput short-read open reading frame prediction., , , , , and . CIBCB, page 1-8. IEEE, (2015)