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OGEE: an online gene essentiality database, , , and . Nucleic Acids Research, 40 (D1): D901--D906 (Jan 1, 2012)Systematic discovery of in vivo phosphorylation networks., , , , , , , , , and 11 other author(s). Cell, 129 (7): 1415--1426 (Jun 29, 2007)Ontologies in Quantitative Biology: A Basis for Comparison, Integration, and Discovery, and . PLoS Biol, 8 (5): e1000374+ (May 25, 2010)Pathway alignment: Application in the comparative analysis of glycolysis., , , and . German Conference on Bioinformatics, Oxford University Press, (1998)Cross-talk between phosphorylation and lysine acetylation in a genome-reduced bacterium, , , , , , , , , and 9 other author(s). Mol. Syst. Biol., (2012)SMART 7: recent updates to the protein domain annotation resource., , and . Nucleic Acids Res., 40 (Database-Issue): 302-305 (2012)Update of the G2D tool for prioritization of gene candidates to inherited diseases., , and . Nucleic Acids Res., 35 (Web-Server-Issue): 212-216 (2007)PTMcode: a database of known and predicted functional associations between post-translational modifications in proteins., , , and . Nucleic Acids Res., 41 (Database-Issue): 306-311 (2013)PAL2NAL: robust conversion of protein sequence alignments into the corresponding codon alignments., , and . Nucleic Acids Res., 34 (Web-Server-Issue): 609-612 (2006)STITCH 3: zooming in on protein-chemical interactions., , , , , and . Nucleic Acids Res., 40 (Database-Issue): 876-880 (2012)