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Comparison of Pseudoknotted RNA Secondary Structures by Topological Centroid Identification and Tree Edit Distance.

, , and . J. Comput. Biol., 27 (9): 1443-1451 (2020)

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Distribution of Distances and Triangles in a Point Set and Algorithms for Computing the Largest Common Point Sets., , and . SCG, page 314-323. ACM, (1997)Protein Side-chain Packing Problem: A Maximum Edge-weight Clique Algorithmic Approach., , , and . APBC, volume 29 of CRPIT, page 191-200. Australian Computer Society, (2004)CHEMILOG - A Logic Programming Language/System for Chemical Information Processing., and . FGCS, page 1176-1183. OHMSHA Ltd. Tokyo and Springer-Verlag, (1988)A Linear Time Pattern Matching Algorithm Between a String and a Tree.. CPM, volume 684 of Lecture Notes in Computer Science, page 1-10. Springer, (1993)Dynamic Programming Algorithms for RNA Structure Prediction with Binding Sites., , and . Pacific Symposium on Biocomputing, page 98-107. World Scientific Publishing, (2010)An Improved Integer Programming Formulation for Inferring Chemical Compounds with Prescribed Topological Structures., , , , , and . IEA/AIE (1), volume 12798 of Lecture Notes in Computer Science, page 197-209. Springer, (2021)Algorithms for identifying Boolean networks and related biological networks based on matrix multiplication and fingerprint function., , and . RECOMB, page 8-14. ACM, (2000)Computational and Statistical Methods in Bioinformatics.. Active Mining, volume 3430 of Lecture Notes in Computer Science, page 11-33. Springer, (2003)Identification of Gene Regulatory Networks by Strategic Gene Disruptions and Gene Overexpressions., , , and . SODA, page 695-702. ACM/SIAM, (1998)A dynamic programming algorithm to predict synthesis processes of tree-structured compounds with graph grammar., , , and . Genome informatics. International Conference on Genome Informatics, (2010)