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Comparison of Pseudoknotted RNA Secondary Structures by Topological Centroid Identification and Tree Edit Distance.

, , and . J. Comput. Biol., 27 (9): 1443-1451 (2020)

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Finding optimal control policy in Probabilistic Boolean Networks with hard constraints by using integer programming and dynamic programming., , , and . BIBM, page 240-246. IEEE Computer Society, (2010)Matching of Spots in 2D Electrophoresis Images. Point Matching Under Non-uniform Distortions., , , and . CPM, volume 1645 of Lecture Notes in Computer Science, page 212-222. Springer, (1999)Measuring Structural Robustness of Metabolic Networks under a Boolean Model Using Integer Programming and Feedback Vertex Sets., , and . CISIS, page 819-824. IEEE Computer Society, (2009)Host-Pathogen Protein Interaction Prediction Based on Local Topology Structures of a Protein Interaction Network., , , and . BIBE, page 7-12. IEEE Computer Society, (2016)On the approximation of protein threading., and . RECOMB, page 3-8. ACM, (1997)Topological aspects of protein networks., , and . Emergent Intelligence of Networked Agents, volume 56 of Studies in Computational Intelligence, Springer, (2007)Approximation and Exact Algorithms for RNA Secondary Structure Prediction and Recognition of Stochastic Context-Free Languages.. ISAAC, volume 1533 of Lecture Notes in Computer Science, page 337-346. Springer, (1998)Efficient computation of impact degrees for multiple reactions in metabolic networks with cycles., , , and . DTMBIO, page 67-70. ACM, (2009)A New Integer Linear Programming Formulation to the Inverse QSAR/QSPR for Acyclic Chemical Compounds Using Skeleton Trees., , , , , and . IEA/AIE, volume 12144 of Lecture Notes in Computer Science, page 433-444. Springer, (2020)A Variational Bayesian EM Algorithm for Tree Similarity., , and . ICPR, page 1056-1059. IEEE Computer Society, (2010)