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Change-O: a toolkit for analyzing large-scale B cell immunoglobulin repertoire sequencing data.

, , , , , and . Bioinform., 31 (20): 3356-3358 (2015)

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Mutation parameters from DNA sequence data using graph theoretic measures on lineage trees., , and . ISMB (Supplement of Bioinformatics), page 332-340. (2006)Formalizing the Representation of Immune Exposures for Human Immunology Studies., , , , and . ICBO, volume 2285 of CEUR Workshop Proceedings, CEUR-WS.org, (2018)Reporting and connecting cell type names and gating definitions through ontologies., , , , , , , , and . BMC Bioinform., 20-S (5): 259-264 (2019)Change-O: a toolkit for analyzing large-scale B cell immunoglobulin repertoire sequencing data., , , , , and . Bioinform., 31 (20): 3356-3358 (2015)Activated Germinal-Center B Cells Undergo Directed Migration., , , and . BIBM, page 327-331. IEEE Computer Society, (2009)Multiple network-constrained regressions expand insights into influenza vaccination responses., , , , , , , , and . Bioinform., 33 (14): i208-i216 (2017)VDJML: a file format with tools for capturing the results of inferring immune receptor rearrangements., , , , , , , , , and 13 other author(s). BMC Bioinform., 17 (S-13): 333 (2016)Graded Vector Representations of Immunoglobulins Produced in Response to West Nile Virus., , , , and . QI, volume 10106 of Lecture Notes in Computer Science, page 135-148. Springer, (2016)Somatic hypermutation analysis for improved identification of B cell clonal families from next-generation sequencing data., and . PLoS Comput. Biol., (2020)Association between response to brief trastuzumab exposure in cell lines and early stage HER2+ breast tumors., , , , , , , , and . BCB, page 446-450. ACM, (2011)